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BioLiveCd

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BioLiveCd

  1. 1. BioLiveCD 2008.Apr.15 Eric
  2. 2. Outline • Motivation • About Live CD • Application Software • Copyright • Advantage • Conclusion 2
  3. 3. Motivation The paper about bioinformatic tools Book for Bioinformatics Computer Skills My laziness 3
  4. 4. About Live CD Work without hard drive A bootable disc Run system on memory reboot for default setting LiveUSB is better 4
  5. 5. • Like general operating system install procedure. • Including hardware driver. (for general hardware device) • Initialize the system, prepare for command shell or GUI interface for user. A bootable disc 5
  6. 6. • Doesn’t have to install hard drive. • Create a temporary partition on memory. • Performance depend on memory specification and size. Run system on memory 6
  7. 7. • Better than optical drive. • Provide storage space. • Easy to carry, and it’s convenient to modify the current system content. Live USB 7
  8. 8. Application Software Bioinformatic Tools General 8
  9. 9. General Apps Terminal IDE Viewer Browser Text editor 9
  10. 10. Bioinformatic Tools BioRuby BioPython 10
  11. 11. Copyright • Property • GPL • LGPL • BSD • MIT • Free for academic users, Unavailable 11
  12. 12. Property All right reserved 12
  13. 13. GPL GNU General Public License • First open source software license • Freedom of use • Freedom of research • Freedom of distribution • Freedom of improvement • Ex. BioPerl 13
  14. 14. LGPL Lesser General Public License • Like GPL • But LGPL for the “Library” • Ex. BioRuby, Jmol 14
  15. 15. BSD Berkeley Software Distribution • Release all rights. • Use software free, including copy, distribute, edit, commercial use. • Low law risk. 15
  16. 16. MIT Massachusetts Institute • A.k.a. “X11 License” • Release all rights, like BSD license. • Allow developer change the license agreement content. • Also suit for documentation files. 16
  17. 17. Academic User • For research, non-commercial user Unavailable • Developer wasn’t declare the license type. 17
  18. 18. Advantage • Save time • Help starter learning bioinformatic tools • Promote our lab, research center 18
  19. 19. Conclusion • The storage of raw data. • Disc update time • Compatible for machine • License • Product differentiation : Pro version for sell 19

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