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The Research Proposal and Milestone
Speaker : Jimmy Lu
Advisor : Hsing Mei
Web Computing Laboratory(WECO Lab)
Computer Sci...
Outline
2015/1/30 2
WECO Lab, CSIE dept., FJU
http://www.weco.net
 The steps of defining the brain
components
 The netwo...
What am I doing
2015/1/30 3
WECO Lab, CSIE dept., FJU
http://www.weco.net
 A brain simulator that simulates
structural dy...
The Brain Components
2015/1/30 4
WECO Lab, CSIE dept., FJU
http://www.weco.net
 There are a lot of components in the
huma...
The Brain Components
2015/1/30 5
WECO Lab, CSIE dept., FJU
http://www.weco.net
 However it is still too many
components t...
The Connections
2015/1/30 6
WECO Lab, CSIE dept., FJU
http://www.weco.net
 How about the connections?
 Find out the conn...
How to utilizing OO concept?
2015/1/30 7
WECO Lab, CSIE dept., FJU
http://www.weco.net
 It seems that object-oriented con...
Design Patterns
2015/1/30 8
WECO Lab, CSIE dept., FJU
http://www.weco.net
Network approach model
2015/1/30 9
WECO Lab, CSIE dept., FJU
http://www.weco.net
 The internet, peer-to-peer, error and
a...
How to verify the model
2015/1/30 10
WECO Lab, CSIE dept., FJU
http://www.weco.net
 Compare to image data
Expected Results
2015/1/30 11
WECO Lab, CSIE dept., FJU
http://www.weco.net
 A simple brain structural simulator
which si...
Milestone
2015/1/30 12
WECO Lab, CSIE dept., FJU
http://www.weco.net
 October ~ February:
 Define components and connect...
Milestone
2015/1/30 13
WECO Lab, CSIE dept., FJU
http://www.weco.net
 May:
 Prepare oral presentation
 Thesis revision
2015/1/30
WECO Lab, CSIE dept., FJU
http://www.weco.net
14
1. Erich Gamma, Richard Helm, Ralph Johnson and John M. Vlissid...
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Research Proposal and Milestone

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Speaker: Jimmy Lu
Topics: Research Proposal and Milestone
Date: 2010.10.09

WECO Lab, CSIE, FJU

Published in: Technology
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Research Proposal and Milestone

  1. 1. The Research Proposal and Milestone Speaker : Jimmy Lu Advisor : Hsing Mei Web Computing Laboratory(WECO Lab) Computer Science and Information Engineering Department Fu Jen Catholic University
  2. 2. Outline 2015/1/30 2 WECO Lab, CSIE dept., FJU http://www.weco.net  The steps of defining the brain components  The network approach for modeling Alzheimer’s disease  Implementation details  Expected results  The milestone
  3. 3. What am I doing 2015/1/30 3 WECO Lab, CSIE dept., FJU http://www.weco.net  A brain simulator that simulates structural dynamics of the human brain.  A network dynamics approach for modeling the Alzheimer’s disease.  Define the brain components by utilizing object-oriented concept.
  4. 4. The Brain Components 2015/1/30 4 WECO Lab, CSIE dept., FJU http://www.weco.net  There are a lot of components in the human brain, it is extremely complex and makes me confused even I’ve studied neuroanatomy. Is there any reference to help me to define the components?  Wikipedia -> Human Brain
  5. 5. The Brain Components 2015/1/30 5 WECO Lab, CSIE dept., FJU http://www.weco.net  However it is still too many components that I can’t completely define them  Find out the most relevant part to the Alzheimer’s disease  Find out the most relevant part with acetylcholine
  6. 6. The Connections 2015/1/30 6 WECO Lab, CSIE dept., FJU http://www.weco.net  How about the connections?  Find out the connections from the context of the books of neruoanatomy or the wikipedia.  Use existing imaging tools to finds out the structural or functional connectivity. Getting imaging data first. Ex: Diffusion tensor imaging data.
  7. 7. How to utilizing OO concept? 2015/1/30 7 WECO Lab, CSIE dept., FJU http://www.weco.net  It seems that object-oriented concept are quite suitable for defining components of the human brain.  However it is not appropriate to use “inheritance” concepts only.  I need more powerful tools.  Design pattern[1]
  8. 8. Design Patterns 2015/1/30 8 WECO Lab, CSIE dept., FJU http://www.weco.net
  9. 9. Network approach model 2015/1/30 9 WECO Lab, CSIE dept., FJU http://www.weco.net  The internet, peer-to-peer, error and attack tolerance of complex networks[2], network damage models[3]  Key element: acetylcholine
  10. 10. How to verify the model 2015/1/30 10 WECO Lab, CSIE dept., FJU http://www.weco.net  Compare to image data
  11. 11. Expected Results 2015/1/30 11 WECO Lab, CSIE dept., FJU http://www.weco.net  A simple brain structural simulator which simulate the dynamics of brain structural connectivity of AD.  A model which describes how ACh effect on the brain of AD patients.  Library of the brain components and the connections.
  12. 12. Milestone 2015/1/30 12 WECO Lab, CSIE dept., FJU http://www.weco.net  October ~ February:  Define components and connections of the human brain  Implementation  Model  February ~ April:  Modification and verification  Thesis writing
  13. 13. Milestone 2015/1/30 13 WECO Lab, CSIE dept., FJU http://www.weco.net  May:  Prepare oral presentation  Thesis revision
  14. 14. 2015/1/30 WECO Lab, CSIE dept., FJU http://www.weco.net 14 1. Erich Gamma, Richard Helm, Ralph Johnson and John M. Vlissides, “Design Patterns: Elements of Reusable Object-Oriented Software”, Addison-Wesley Professional (1994) 2. Reka Albert, Hawoong Jeong and Albert-Laszlo Barabasi, “Error and attack tolerance of complex networks”, Nature 406 378-382 (2000) 3. C. J. Stam, W. de Haan, A. Daffertshofer, B. F. Jones, I. Manshanden, A. M. van Cappellen van Walsum, T. Montez, J. P. A. Verbunt, J. C. de Munck, B. W. van Dijk, H. W. Berendse and P. Scheltens, “Graph theoretical analysis of magnetoencephalographic functional connectivity in Alzheimer’s disease”, Brain 132 213–224 (2009)

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