Successfully reported this slideshow.
We use your LinkedIn profile and activity data to personalize ads and to show you more relevant ads. You can change your ad preferences anytime.



Published on

chapter 9 by karp part 1

Published in: Education
  • Be the first to comment


  1. 1. Cytoskeleton
  2. 2. • Form an elaborate interactive network of polymers of protein subunits held together by weak, noncovalent bonds• Although they appear stationary in micrographs, they are highly dynamic structures capable of dramatic reorganization• Recent study suggested that prokaryotes prokaryotes have proteins that carry cytoskeletal-like activities
  3. 3. Microtubules• Long, hollow, and stiff unbranched tubes found in all eukaryotes that are distributed in the cytoplasm• Functions in support, intracellular transport, and cell organization• Composed of subunits of tubulin
  4. 4. Intermediate filaments• Tough, ropelike fibers found in the nucleus and cytoplasm of animals• Functions in structural support• Composed of a variety of proteins
  5. 5. Microfilaments• Solid, thin structures found in the cytoplasm of eukaryotes that are often organized into a branching network• Functions in motility and contractility• Composed of actin
  6. 6. Study of the cytoskeletonLive-cell fluorescence imaging• allows researchers to directly observe molecular processes in living cells—an approach known as live-cell imaging
  7. 7. FIGURE 9.4 Dynamic changes in length of microtubules within an epithelial cell. The cell was injected with a small volume oftubulin that had been covalently linked to the fluorescent dye rhodamine. After allowing time for the cell to incorporate the labeled tubulin into microtubules, a small portion of the edge of the living cell was examined under the fluorescence microscope.
  8. 8. In Vitro and In Vivo Single-molecule Assays• high-resolution video microscopy has led to the development of in vitro motility assays• Single-molecule assays have allowed researchers to make measurements that were not possible with standard biochemical techniques that average the results obtained from large numbers of molecules
  9. 9. In some of the earlier assays, microtubuleswere attached to a glass coverslip. Then,microscopic beads containing attached motorproteins were placed directly onto themicrotubules using aimed laser beams. Thelaser beams are shone through the objectivelens of a microscope, producing a weakattractive force near the point of focus.Because it can grasp microscopic objects, thisapparatus is referred to as optical tweezers.
  10. 10. When ATP is present as an energy source, themovements of a bead along a microtubule canbe followed by a video camera, revealing thesize of individual steps taken by the motorprotein. Focused laser beams can also be usedto “trap” a single bead and determine theminute forces (measured as a fewpiconewtons, pN) generated by a single motorprotein as it “tries” to move the bead againstthe force exerted by the optical trap
  11. 11. In this experiment a purified GFP-labeled kinesin molecule is seen to move processively along a microtubule whose plus end is labeled with a red fluorescent dye named Cy5.The clarity of these images is made possible by the use of a specialized type of laser-based fluorescence microscopy called TIRF (total internal reflection microscopy)
  12. 12. Atomic force microscopy-measures the mechanical properties of thecytoskeletal elements themselves. AFM is aninstrument that uses a nanosized tip to probethe surface of a macromolecular specimen
  13. 13. - embed the tip of an AFM into a single intermediate filament and pull on the end or the middle of the filament to test its extensibility and tensile strength.- a segment of filament can be mechanically stretched up to 3.5 times its normal length before it breaks into two pieces
  14. 14. Microtubules• components of a diverse array of structures, including the mitotic spindle of dividing cells and the core of cilia and flagella• outer diameter of 25 nm and a wall thickness of approximately 4 nm, and may extend across the length or breadth of a cell• wall of a microtubule is composed of globular proteins arranged in longitudinal rows, protofilaments, that are aligned parallel to the long axis of the tubule• 13 protofilaments aligned side by side in a circular pattern within the wall
  15. 15. • Each protofilament is assembled from dimeric building blocks consisting of one alpha-tubulin and one beta- tubulin subunit• The tubulin dimers are organized in a linear array along the length of each protofilament• All of the protofilaments of a microtubule have the same polarity. Consequently, the entire polymer has polarity. One end of a microtubule is known as the plus end and is terminated by a row of beta-tubulin subunits. The opposite end is the minus end and is terminated by a row of alpha- tubulin subunits(p325, d)
  16. 16. • contain additional proteins, called microtubule-associated proteins (MAPs)• The binding of one of these MAPs to the surface of a microtubule connects microtubules to each other, thus maintaining their parallel alignment. MAPs generally increase the stability of microtubules and promote their assembly
  17. 17. Motor Proteins that Traverse the Microtubular skeleton• convert chemical energy (stored in ATP) into mechanical energy, which is used to generate force or to move cellular cargo attached to the motor• Collectively, motor proteins can be grouped into three broad superfamilies: kinesins, dyneins, and myosins. Kinesins and dyneins move along microtubules
  18. 18. Kinesins - discovered in 1985 by Ronald Vale and colleagues when they isolated a motor protein from the cytoplasm of squid giant axons - tetramer constructed from two identical heavy chains and two identical light chains• The routes followed by cytoplasmic vesicles and organelles are largely defined by microtubules, and members of the kinesin superfamily are strongly implicated as force-generating agents that drive the movement of this membrane bounded cargo
  19. 19. Cytoplasmic Dynein- discovered in 1963 as the protein responsiblefor the movement of cilia and flagella-a huge protein composed of two identicalheavy chains and a variety of intermediateand light chains. Each dynein heavy chainconsists of a large globular head(forcegenerating agent) with an elongatedprojection (stalk)
  20. 20. • As a force-generating agent in positioning the spindle and moving chromosomes during mitosis• As a minus end–directed microtubular motor with a role in positioning the centrosome and Golgi complex and moving organelles, vesicles, and particles through the cytoplasm
  21. 21. Intermediate filaments• strong, flexible ropelike fibers that provide mechanical strength to cells that are subjected to physical stress, including neurons, muscle cells, and the epithelial cells that line the body’s cavities with a diameter of 10–12 nm• chemically heterogeneous group of structures that, in humans, are encoded by approximately 70 different genes
  22. 22. • FIGURE 9.40 Cytoskeletal elements are connected to one another by protein cross-bridges. Electron micrograph of a replica of a small portion of the cytoskeleton of a fibroblast after selective removal of actin filaments. Individual components have been digitally colorized to assist visualization. Intermediate filaments (blue) are seen to be connected to microtubules (red) by long wispy cross-bridges consisting of the fibrous protein plectin (green).
  23. 23. Types of IFTypes I and II: Acidic Keratin and Basic Keratin, respectively. Produced by different types of epithelial cells (bladder, skin, etc)Type III. Intermediate filaments are distributed in a number of cell types, including: Vimentin in fibroblasts, endothelial cells and leukocytes; desminin muscle; glial fibrillary acidic factor in astrocytes and other types of glia, and peripherin in peripheral nerve fibersType IV Neurofilament H (heavy), M (medium) and L (low). Modifiers refer to the molecular weight of the NF proteins. Another type IV is "internexin" and some nonstandard IVs are found in lens fibers of the eye (filensin and phakinin).Type V are the lamins which have a nuclear signal sequence so they can form a filamentous support inside the inner nuclear membrane. Lamins are vital to the re-formation of the nuclear envelope after cell division