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WP2 pre-breeding
State of progress
State of progress of the ongoing tasks

• Task 2.1: Evaluation of material
  – 82 populations and 18 individuals have been
    evaluated for peach (e.g. resistance to powdery
    mildew and green peach aphid, tolerance to
    brown rot, fruit characteristics)
  – 4 populations and some individuals have been
    evaluated for apple (e.g. resistance to fire blight,
    powdery mildew, scab, fruit size)
  – individuals have been chosen for crosses
State of progress of the ongoing tasks

• Task 2.2: conventional pre-breeding
  – 28 crosses resulting in 1,331 seedlings were
    performed for peach to introduce and/or combine
    resistances, especially tolerance to Monilinia, together
    with fruit characteristics.
  – 11 crosses resulting in around 1,500 seeds were
    performed for apple to introduce Rvi11 and Rvi12 into
    low chilling and high quality varieties and to pyramid
    and/or combine scab and powdery mildew resistance
    genes
  – seeds were stratified and sown out (peach and apple)
  – seedlings just inoculated with scab (apple)
State of progress of the ongoing tasks

• Task 2.2: some of the crosses performed
   Traits - mother                          Traits - father                   No. ind.

   peach

   Vr1vr1; yy; gg; dd; mat.: early august   S*s*; Dd; Gg; Yy;                        30

   Vr1vr1; yy; gg; dd; mat.: early august   gg; yy; Dd; maturity early july          30

   Resistance to mildew                     resistance to brown rot                  41

   tolerant to brown rot                    quality                                  60

   apple

   Rvi6Rvi2Pl2                              Rvi6Rvi2Pl2                             187
   Pl1, Rvi6                                Pld                                      0
   Rvi12                                    Anna (low chill)                         2
   Gala (quality)                           Rvi11                                   139
State of progress of the ongoing tasks

• Task 2.3: fast breeding
   – application of the system
       • fire blight resistance QTL from Evereste and Mr5 was introduced in to the fast
         breeding system
       • genetic drag was determined for progeny with Evereste (seedlings with 17% of
         Evereste genome)
       • MAS was applied for progeny of Mr5 (FbR3, Pl1, Er2)
   – improvement of the system
       • 5 lines carrying the early flowering gene were propagated
       • transformations with the early flowering gene under control of 35S are
         initiated (other cultivars than Pinova)
       • construct with early flowering gene under control of an inducible promoter
         was created – Gmhsp17.5-E (HSP)
       • transformations with Gala, Pinova and Mariri Red were done (regenerants for
         Pinova and Gala were obtained)
       • vector was constructed for silencing the MdTFL1 gene (flowering gene
         repressor) under the control of HSP
Milestones and Deliverables status

• D2.1 (M23): Detailed description of available genetic material
  (wild relatives, cultivars or advanced selections, progenies)
  carrying the chosen traits and useful for breeding.
   – cultivars, selections and progenies were phenotyped for
     traits of interest
   – marker data available for selected progeny, individuals
• M2.1 (M23): Parents and selected crosses.
   – first parents were chosen for crosses, crosses were
     performed
Expected delays and problems

• Problem  corrective action (list here the
  problems identified and the potential delays
  identified, as well as the corrective actions
  planned)
• too less seeds in some progenies  new
  crosses in 2012 (peach and apple)
• PhD left at JKI, more input from existing staff
Tasks to be done during the Annual
Meeting
•   Task 2.1:
     – determining descriptors for detailed description of available plant material
     – availability, need and use of markers/screening methods for description of plant material (e.g.
       Rvi11, brown rot, powdery mildew)
     – way of proceeding with Task 2.1
     – input of descriptions in database WP 7?
•   Task 2.2:
     – possibilities to accelerate breeding cycles in apple and peach conventionally and attempts for
       comparison
     – availability, need and use of markers/screening methods for description of plant material (e.g.
       Rvi11, brown rot, powdery mildew)
     – way of proceeding with Task 2.2
          •     way of further selection? - whole genome selection, growth traits, use of SNP-chip to determine
                quality seedlings
          •     further crosses?
     – demands of the stakeholders regarding traits of interest – “exotic traits”
     – closer cooperation – access to material (building of pools, determining breeding value)
•   Task 2.3:
     – need, utility and application of the transgenic fast breeding system (interest of stakeholders)

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FruitBreedomics 1st Annual meeting 20120208 WP2 Overview of state of progress

  • 2. State of progress of the ongoing tasks • Task 2.1: Evaluation of material – 82 populations and 18 individuals have been evaluated for peach (e.g. resistance to powdery mildew and green peach aphid, tolerance to brown rot, fruit characteristics) – 4 populations and some individuals have been evaluated for apple (e.g. resistance to fire blight, powdery mildew, scab, fruit size) – individuals have been chosen for crosses
  • 3. State of progress of the ongoing tasks • Task 2.2: conventional pre-breeding – 28 crosses resulting in 1,331 seedlings were performed for peach to introduce and/or combine resistances, especially tolerance to Monilinia, together with fruit characteristics. – 11 crosses resulting in around 1,500 seeds were performed for apple to introduce Rvi11 and Rvi12 into low chilling and high quality varieties and to pyramid and/or combine scab and powdery mildew resistance genes – seeds were stratified and sown out (peach and apple) – seedlings just inoculated with scab (apple)
  • 4. State of progress of the ongoing tasks • Task 2.2: some of the crosses performed Traits - mother Traits - father No. ind. peach Vr1vr1; yy; gg; dd; mat.: early august S*s*; Dd; Gg; Yy; 30 Vr1vr1; yy; gg; dd; mat.: early august gg; yy; Dd; maturity early july 30 Resistance to mildew resistance to brown rot 41 tolerant to brown rot quality 60 apple Rvi6Rvi2Pl2 Rvi6Rvi2Pl2 187 Pl1, Rvi6 Pld 0 Rvi12 Anna (low chill) 2 Gala (quality) Rvi11 139
  • 5. State of progress of the ongoing tasks • Task 2.3: fast breeding – application of the system • fire blight resistance QTL from Evereste and Mr5 was introduced in to the fast breeding system • genetic drag was determined for progeny with Evereste (seedlings with 17% of Evereste genome) • MAS was applied for progeny of Mr5 (FbR3, Pl1, Er2) – improvement of the system • 5 lines carrying the early flowering gene were propagated • transformations with the early flowering gene under control of 35S are initiated (other cultivars than Pinova) • construct with early flowering gene under control of an inducible promoter was created – Gmhsp17.5-E (HSP) • transformations with Gala, Pinova and Mariri Red were done (regenerants for Pinova and Gala were obtained) • vector was constructed for silencing the MdTFL1 gene (flowering gene repressor) under the control of HSP
  • 6. Milestones and Deliverables status • D2.1 (M23): Detailed description of available genetic material (wild relatives, cultivars or advanced selections, progenies) carrying the chosen traits and useful for breeding. – cultivars, selections and progenies were phenotyped for traits of interest – marker data available for selected progeny, individuals • M2.1 (M23): Parents and selected crosses. – first parents were chosen for crosses, crosses were performed
  • 7. Expected delays and problems • Problem  corrective action (list here the problems identified and the potential delays identified, as well as the corrective actions planned) • too less seeds in some progenies  new crosses in 2012 (peach and apple) • PhD left at JKI, more input from existing staff
  • 8. Tasks to be done during the Annual Meeting • Task 2.1: – determining descriptors for detailed description of available plant material – availability, need and use of markers/screening methods for description of plant material (e.g. Rvi11, brown rot, powdery mildew) – way of proceeding with Task 2.1 – input of descriptions in database WP 7? • Task 2.2: – possibilities to accelerate breeding cycles in apple and peach conventionally and attempts for comparison – availability, need and use of markers/screening methods for description of plant material (e.g. Rvi11, brown rot, powdery mildew) – way of proceeding with Task 2.2 • way of further selection? - whole genome selection, growth traits, use of SNP-chip to determine quality seedlings • further crosses? – demands of the stakeholders regarding traits of interest – “exotic traits” – closer cooperation – access to material (building of pools, determining breeding value) • Task 2.3: – need, utility and application of the transgenic fast breeding system (interest of stakeholders)