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The FAIRDOM Commons for Systems Biology

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FAIRDOM

Written and presented by Carole Goble (University of Manchester) as part of the Reproducible and Citable Data and Models Workshop in Warnemünde, Germany. September 14th - 16th 2015.

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The FAIRDOM Commons
for Systems Biology
Prof Carole Goble
FAIRDOM Consortium
The University of Manchester, UK
carole.goble@manchester.ac.uk
EraSysAPP Workshop Data Citation and Model Reproducibility, Rostock, 14-16 Sept 2015
Findable
Accessible
Interoperable
Reusable
Data
S O Ps
Models
http://www.fair-dom.org
http://www.fairdomhub.org
Assets
Commons and
Catalogue for
Sys Bio Projectshttp://www.seek4science.org
Data
Samples
SOPs
Models
Publications
For results to be citable, they have to
be…
• Findable
• Available (Shared)
• Interoperable
• Reusable/Reproducible
SingleType-specific structured archives
General cloud
unstructured
archives
Public Archives for Asset Sharing
typically end results and usually public
Institutional Repositories
Project Centric: Programmes, Projects,
Groups, Individuals
Is there any group generating
kinetic data?
Is this data available?
What methods are been used to
determine enzyme activity?
What SOP was used for
this sample?
Where is the validation data for
this model?

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The FAIRDOM Commons for Systems Biology