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GENETIC	CHARACTERIZATION	OF	THE	2016		
FOOT-AND-MOUTH	DISEASE	VIRUSES	IN	SOUTH	KOREA
						B.K.	Ku,	J.J	Nah,	S.Y.	Ryoo,T.S.	Kim,	M.G.	Sagong,	S.M.	Lee,	K.N	Lee,	D.S.	Tark,	Y.J.	Ko1,H.M.	Pyo,M.K	Shin,	J.H.	Park,	M.H.	Lee,	S.H.	
Wee	
Foot-and-Mouth	Disease	Division,	Animal	and	Plant	Quaran8ne	Agency,		Korea.	
				Outbreak	:	21	sites,	35	days,	slaughtered		33,000	pigs.	
	
						VP1	gene	homology	:	as	high	as	99.22%	with	2014	to	2015	virus	
	
						Epidemiology	:	2014to15	virus	survived,	reappeared	in	the	farms		
																																			where	vaccina8on	and	biosecurity	were	insufficient
OS16	
Table 1. The results and number of the tested samples for detection of foot-and-mouth disease virus (FMDV)
during the foot-and-mouth disease (FMD) epidemic.
Test items No. of cases
Real time RT-PCR(rRT-PCR)
(No. of positive farms /No. of tested farms)
Suspected cases 7 7(7)
Epidemiologically linked farms 15 1(15)
Virological Surveillance 74 13(74)
Lifting of movement restrictions &
control zone 156 0(156)
Contaminated Environment 36 2 (36)
Total 288 288(23)
OS16	
Table 2. Summary of laboratory results for FMD serotypes O 21 outbreaks in 2016, Korea.
Test
Items
Outbreak date/
Infected farms
City (Provinces)
Antibody detection
(No. of animals/ No. of tested animals) Antigen detection
SP ELISA NSP ELISA rRT-PCR Virus Isolation
1 11 Jan /IF1 Kimje(Jeonbuk) 6/21 0/21 + +
1 13 Jan/IF2 Gochang(Jeonbuk) 3/21 0/21 + +
1 17 Feb/IF3 Kongju(Chungnam) 14/18 0/18 + +
1 17 Feb/IF4 Cheonan(Chungnam) 19/19 3/19 + +
2 24 Feb/IF5 Kongju(Chungnam) 26/64 7/64 + +
1 7 Mar/IF6 Nonsan* (Chungnam) 2/16 0/16 + +
1 10 Mar/IF7 Nonsan(Chungnam) 11/16 0/16 + +
2 11 Mar/IF8 Nonsan(Chungnam) 52/64 0/64 + +
2 11 Mar/IF9 Nonsan(Chungnam) 5/16 0/16 + +
2 11 Mar/IF10 Nonsan(Chungnam) 10/16 0/16 + +
2 11 Mar/IF11 Nonsan(Chungnam) 94/112 8/112 + +
2 11 Mar/IF12 Nonsan(Chungnam) 8/16 0/16 + +
2 14 Mar/IF13 Nonsan(Chungnam) 16/16 0/16 + +
1 14 Mar/IF14 Nonsan(Chungnam) 16/16 0/16 + -
2 18 Mar/IF15 Nonsan(Chungnam) 14/16 0/16 + +
3 20 Mar/IF16 Nonsan(Chungnam) 15/16 1/16 + +
2 21Mar/IF17 Hongseong(Chungnam) 13/16 6/16 + +
2 21Mar/IF18 Nonsan(Chungnam) 10/16 0/16 + -
2 21Mar/IF19 Nonsan(Chungnam) 14/16 0/16 + +
2 24 Mar/IF20 Nonsan(Chungnam) 9/16 0/16 + +
2 29 Mar/IF21 Hongseong(Chungnam) 34/34 11/34 + -
Open	Session	of	the	EuFMD	-	Cascais	–Portugal	26-28	October	2016	
Fig.1. Phylogenetic tree analysis using the VP1 region of FMDVs identified in Korea, 2015–2016.
Representing the first disease case and the second disease case .

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