Successfully reported this slideshow.
We use your LinkedIn profile and activity data to personalize ads and to show you more relevant ads. You can change your ad preferences anytime.

eNanoMapper solutions for FAIR sharing of nanosafety data

627 views

Published on

Research Data Management (RDM) need solutions that enable to make your data FAIR (findable, accessible, intereoperable, and reusable). The European Commission-funded FP7 project eNanoMapper developed such solutions for the NanoSafety Cluster, but the story of eNanoMapper did not end with the end of the funding.

Published in: Data & Analytics
  • Be the first to comment

  • Be the first to like this

eNanoMapper solutions for FAIR sharing of nanosafety data

  1. 1. eNanoMapper solutions for FAIR sharing of nanosafety data eNanoMapper solutions for FAIR sharing of nanosafety data Egon Willighagen, Maastricht University @enanomapper #nanotox2018 NanoTox 2018, Neuss/DE, 2018-09-20
  2. 2. Acknowledgements: eNanoMapper projectAcknowledgements: eNanoMapper project Key info 5 mEuro (4 mEuro funded by EC) 8/9 partners 3 years, ended 31 jan 2017
  3. 3. FAIR?FAIR? doi:10.1038/sdata.2016.18
  4. 4. A FAIR-y eNanoMapperA FAIR-y eNanoMapper ● Findable – RDF at the core, identifiers for substances, compounds, and bundles (data sets) ● Accessible – website, API ● Interoperable – ontology, identifiers, standards – various formats, application-oriented ● Reusable? (metadata useful...)
  5. 5. eNanoMapper OntologyeNanoMapper Ontology
  6. 6. eNanoMapper OntologyeNanoMapper Ontology
  7. 7. eNanoMapper OntologyeNanoMapper Ontology
  8. 8. User Guidance: OECD materialsUser Guidance: OECD materials http://specs.enanomapper.net/oecd/
  9. 9. User Guidance: JRC NanomaterialsUser Guidance: JRC Nanomaterials http://specs.enanomapper.net/jrc/
  10. 10. Using the ontologyUsing the ontology egonw.github.io/nmsa/
  11. 11. Download the ontologyDownload the ontology Open in Protegé purl.enanomapper.org/onto/enanomapper.owl
  12. 12. https://data.enanomapper.nethttps://data.enanomapper.net
  13. 13. European Union Nanomaterial ObservatoryEuropean Union Nanomaterial Observatory
  14. 14. eNanoMapper Docker (on OpenRiskNet)eNanoMapper Docker (on OpenRiskNet)
  15. 15. Searching dataSearching data integration https://search.data.enanomapper.net
  16. 16. Mapping the spreadsheet content into the data model Mapping the spreadsheet content into the data model JSON (JavaScript Object Notation) is a lightweight data- interchange format. through JSON configuration
  17. 17. Mapping the spreadsheet content into the data model Mapping the spreadsheet content into the data model JSON (JavaScript Object Notation) is a lightweight data-interchnge format.
  18. 18. eNanoMapper RDF: semantic formateNanoMapper RDF: semantic format
  19. 19. Answering scientific questions ...Answering scientific questions ...
  20. 20. Application Programming Interface (API)Application Programming Interface (API)
  21. 21. Javascript library (ambit.js + d3.js)Javascript library (ambit.js + d3.js) egonw.github.io/enmSummaries/
  22. 22. Reusable: (bio)schema.orgReusable: (bio)schema.org
  23. 23. User Guidance: Tutorials and ELIXIR TeSSUser Guidance: Tutorials and ELIXIR TeSS
  24. 24. The eNanoMapper journey continuesThe eNanoMapper journey continues Our solutions are Open Source, use Open Standards, and some data we extracted from literature is Open Data. github.com/enanomapper/ enanomapper.net enanomapper.github.io/tutorials/ @enanomappper

×