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LABORATORY SAFETY
WORKING WITH
TUBERCULOSIS
Dr.T.V.Rao MD
3/30/2018 Dr.T.V.Rao MD 1
LABORATORY SAFETY – AS
DEFINED BY WHO
• Laboratory biosafety is the
process of applying a
combination of administrative
controls, containment principles,
practices and procedures, safety
equipment, emergency
preparedness, and facilities to
enable laboratory staff to work
safely with potentially infectious
microorganisms;
3/30/2018 Dr.T.V.Rao MD 2
Section 5 (a)(1) of the OSH Act states
Protects Health care Workers
• Section 5 (a)(1) of the OSH
Act states:
• “Each employer shall furnish
to each of his employees
employment and a place of
employment which are free
from recognized hazards that
are causing or are likely to
cause death or serious
physical harm to his
employees.”
3/30/2018 Dr.T.V.Rao MD 3
Where Is TB Found in the Workplace?
•Healthcare Facilities
•Correctional Institutions
•Homeless Shelters
•Long-term Care
Facilities for the Elderly
•Drug Treatment Centers
•DIAGNOSTIC
LABORATORIES
3/30/2018 Dr.T.V.Rao MD 4
Feasible and Useful
TB Abatement Methods
• Protocol for the early
identification of individuals
with active tuberculosis
• Medical surveillance
• Case management of
infected employees
• Worker training and
education
• Engineering controls
3/30/2018 Dr.T.V.Rao MD 5
Biosafety Levels
• Laboratory workers who
handle infectious materials
in the microbiology
laboratory should be
aware of the work
practices, safety
equipment, and barriers
that will protect them, and
others in the area, from
infectious agents
3/30/2018 Dr.T.V.Rao MD 6
BIOSAFETY AIMS AT
•Biosafety also
aims at preventing
unintentional
exposure to
pathogens or their
accidental release
3/30/2018 Dr.T.V.Rao MD 7
RISK OF TUBERCULOSIS TO
TECHNICIANS
• Infections with M.
tuberculosis are a
proven risk to
laboratory personnel as
well as others who may
be exposed to infectious
aerosols generated by
certain procedures.
3/30/2018 Dr.T.V.Rao MD 8
Increased risk of infection to laboratory staff
• Risk of infection with M.
tuberculosis is 3x to 9x higher for
TB lab workers than for other lab
workers
• Infection often results from
unrecognized production of
infectious aerosols containing
tubercle bacilli
• Infection can occur from needle
sticks, through broken skin, etc
3/30/2018 Dr.T.V.Rao MD 9
Laboratory personal should formulate biosafety to
meet the local needs in the Laboratory
• The biosafety level assigned
to the specific work being
done is driven by
professional judgement
based on an assessment of
the risk rather than by
automatic assignment of a
laboratory biosafety level
according to the particular
risk group assigned to a
pathogenic agent
3/30/2018 Dr.T.V.Rao MD 10
TYPES OF RISK IN THE LABORATORY WORKING
with TUBERCULOSIS
SPECIMENS
•1. Direct microscopy
– minimal risk
2. Processing
specimens –
moderate risk
3. Manipulating
cultures – high risk
3/30/2018 Dr.T.V.Rao MD 11
Key Recommendations working with
Tuberculosis specimens
•Key Recommendations: include 4 main protocols
1Work can be done on an open bench
2Access to the laboratory needs to be restricted
3 Separate bench for smear-preparation
required Adequately ventilated laboratory
with 6-12 air changes per hour (ACH) with
unidirectional airflow with either natural or
mechanical ventilation . 4 Proper
disposal of infectious material
3/30/2018 Dr.T.V.Rao MD 12
3/30/2018 Dr.T.V.Rao MD 13
Biosafety Level Criteria and Requirements for
Handling Specimens Suspected of Containing
Mycobacterium tuberculosis
•All specimens suspected
of containing M.
tuberculosis (including
specimens processed
for other
microorganisms) should
be handled in a
biological safety cabinet
(BSC).
3/30/2018 Dr.T.V.Rao MD 14
USE OF PERSONAL EQUIPMENT
•Appropriate personal
protective equipment
(PPE) must be used.
At a minimum, this
includes gloves and
fluid-resistant
laboratory coat or
gown.
3/30/2018 Dr.T.V.Rao MD 15
Biosafety Levels (BSL)
• Conditions under which an
infectious agent can ordinarily be
safely handled. Conditions are a
combination of:
laboratory practices and
techniques safety equipment
laboratory facilities
Recommended BSLs for many of
the infectious agents have been
developed
• But different methods for the
same agent may require
different BSLs
3/30/2018 Dr.T.V.Rao MD 16
Risk Assessments for TB Procedures
•Based on likelihood of producing infectious
aerosols and the concentration of bacilli
•Limited risk for infectious aerosols direct AFB
smear microscopy Moderate risk for infectious
aerosols processing sputum specimens
High risk for infectious aerosols processing
cultures and suspension
3/30/2018 Dr.T.V.Rao MD 17
Using biological safety cabinets
• Laboratory-acquired
infections often result from
the unrecognized production
of infectious aerosols
containing tubercle bacilli. For
laboratories conducting TB
testing, the most important
hazard (or risk) is the
generation of infectious
aerosols since infection with
TB
3/30/2018 Dr.T.V.Rao MD 18
Making the smears for detection of
Mycobacterium
• Non-aerosol-producing
manipulations (eg, preparing
direct smears for acid-fast staining
when done in conjunction with
training and periodic checking of
competency) can be performed
using biosafety level-2 (BSL-2)
practices and procedures,
containment equipment, and
facilities.
3/30/2018 Dr.T.V.Rao MD 19
Safety level 3 practices in Tuberculosis
specimens
• SL-3 practices,
safety equipment, and facility
design and construction are
applicable to microbiology
laboratories that work with
indigenous or exotic agents
with a potential for
respiratory transmission, and
which may cause serious and
potentially lethal infection. If
the laboratory is propagating
and manipulating cultures for
M. tuberculosis,3/30/2018 Dr.T.V.Rao MD 20
Safety level 3 practices in Tuberculosis
specimens
• BSL-3 practices, containment
equipment, and facilities are required.
Barriers include controlled access
to the laboratory and ventilation
requirements that minimize the
release of infectious aerosols
from the laboratory. Secondary
barriers should include self-closing
double-door access and negative
airflow into the laboratory. Exhausted
air must not be recirculated.
3/30/2018 Dr.T.V.Rao MD 21
AEROSALS ARE HIGHLY INFECTIVE
•Mycobacterium
tuberculosis occurs
primarily through
the inhalation of
infectious aerosols,
although it can also
occur through direct
inoculation or
ingestion.
3/30/2018 Dr.T.V.Rao MD 22
Generation of Aerosols with Tuberculosis
• Infectious aerosols may be
generated during the manipulation
of liquids containing tubercle
bacilli. After settling on surfaces,
droplet nuclei are not
reaerosolized and are considered
non-infectious
• Note .
• That is, M. tuberculosis bacteria are
usually transmitted only through
air, not by surface contact
3/30/2018 Dr.T.V.Rao MD 23
Direct AFB Smear Microscopy
•Limited risk of generating
infectious aerosols
•Work can be done on an
open bench restricted
access to the laboratory
separate bench for smear
preparation
3/30/2018 Dr.T.V.Rao MD 24
Direct AFB Smear
Microscopy•Adequately
ventilated
laboratory 6–12
ACH, directional air
flow natural or
mechanical
ventilation Proper
disposal of
infectious material
3/30/2018 Dr.T.V.Rao MD 25
Processing Sputum Specimens for Smear,
Culture, Molecular Tests – 1
•Moderate risk of generating infectious aerosols
during specimen manipulation Laboratories must
have restricted access and be separated from public
areas
•Impermeable surfaces for easy cleaning
•Air flows into lab without re-circulation to non-lab
areas (directional airflow)6–12 ACH, closed
windows
•Proper disposal of infectious material
3/30/2018 Dr.T.V.Rao MD 26
Processing Sputum Specimens for Smear,
Culture, Molecular Tests – 2
• Class I or II Biosafety Cabinets used for all open
manipulation of agents BSCs must be properly
installed and certified at least annually
• BSC exhaust may be ducted to outside using a hard
duct or thimble fitting (preferred) recirculated into
the room if assured that the BSC is functioning
properly
• Use aerosol-containment rotors
3/30/2018 Dr.T.V.Rao MD 27
TB and Respiratory Protection
• NIOSH certifies three
categories of non-powered
air purifying respirators
based on filtering efficiency.
All three categories are
acceptable for use against TB:
• Type 100 (99.97% efficient)
• Type 99 (99% efficient)
• Type 95 (95% efficient)
3/30/2018 Dr.T.V.Rao MD 28
TB Laboratory Biosafety Gaps
• What are minimum facility requirements?
• U.S./European-style BSL3? containment room, airflow, BSC?
• What are suitable laboratory layouts?
• What are minimum safety requirements for technicians who
are HIV+?
• for areas with high rates of MDR/XDR TB?
• When should respirators be required?
• Are Class I BSCs adequate?
• How to ensure functioning BSCs?
3/30/2018 Dr.T.V.Rao MD 29
CURRENT CONCERNS WITH
MDR TB and
XDR TB
3/30/2018 Dr.T.V.Rao MD 30
3/30/2018 Dr.T.V.Rao MD 31
What is XDR TB
• XDR TB stems from poor general
TB control and the consequent
development of multidrug-
resistant TB (MDR TB). The current
definition of XDR TB is “XDR TB is
TB showing resistance to at least
rifampicin and isoniazid, which is
the definition of MDR TB, in
addition to any fluoroquinolone,
and to at least 1 of the 3 following
injectable drugs used in anti-TB
treatment: capreomycin,
kanamycin and amikacin.”
3/30/2018 Dr.T.V.Rao MD 32
emergence of XDR TB is
The emergence of XDR TB is a
recent phenomenon; evidence
indicating that XDR TB may be a
much higher risk organism from a
laboratory safety perspective may
yet emerge. In that event,
laboratory facilities must
reevaluate their own site-specific
risk assessments in order to
determine if additional safety
measures.
3/30/2018 Dr.T.V.Rao MD 33
Laboratory Safety Working with
XDR TB
• Like other strains of M. tuberculosis, XDR tubercle bacilli may
be present in sputum, gastric lavage fluids, cerebrospinal fluid,
urine, and in a variety of tissues.
2 Exposure to laboratory-generated aerosols is the most
important hazard encountered. Tubercle bacilli may survive in
heat-fixed smears and may be aerosolized in the preparation of
frozen sections and during manipulation of liquid cultures.
Because of the low infective dose of M. tuberculosis (i.e., ID50
<10 bacilli), sputa and other clinical specimens from suspected
or known cases of tuberculosis must be considered potentially
infectious and handled with appropriate precautions.
Accidental needle-sticks are also a recognized hazard.
3/30/2018 Dr.T.V.Rao MD 34
3/30/2018 Dr.T.V.Rao MD 35
Laboratory activities with known XDR TB strains
• Research activities on XDR TB
strains, especially protocols
involving aerosolization of
infectious materials, should only
be undertaken if absolutely
necessary. Researchers and
institutions should review
protocols to determine if less
resistant strains of M.
tuberculosis can be used instead
of XDR TB strains.
3/30/2018 Dr.T.V.Rao MD 36
Using Disinfectants in tuberculosis
• Work surfaces must be
decontaminated, using the
laboratory-approved
disinfectant, upon completion
of procedures, immediately
following a spill, and at the
end of the work shift, if the
surface was re contaminated
since the last cleaning.
Laboratory equipment should
be routinely decontaminated.
3/30/2018 Dr.T.V.Rao MD 37
HAND WASHING A GREAT ACT TO PREVENT
SPREAD OF INFECTIONS INCLDUING TB
•Hands must be
washed upon
completion of work
with potentially
infectious materials
and before leaving
the laboratory.
3/30/2018 Dr.T.V.Rao MD 38
STOPPING TB A GREAT PRIORITY
3/30/2018 Dr.T.V.Rao MD 39
References
•Reference: CDC website. Available at:
•https://www.cdc.gov/tb/topic/laboratory/bi
osafetyguidance_xdrtb.htm. Accessed
November 29, 2017.
•Public health Resources on Tuberculois
•Google resources
3/30/2018 Dr.T.V.Rao MD 40
•Program Created by Dr.T.V.Rao MD for benefit
of laboratory manpower to prevent and control
spread of TB in Health care
•Email
•doctortvrao@gmail.com
3/30/2018 Dr.T.V.Rao MD 41

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LABORATORY SAFETY WORKING WITH TUBERCULOSIS

  • 2. LABORATORY SAFETY – AS DEFINED BY WHO • Laboratory biosafety is the process of applying a combination of administrative controls, containment principles, practices and procedures, safety equipment, emergency preparedness, and facilities to enable laboratory staff to work safely with potentially infectious microorganisms; 3/30/2018 Dr.T.V.Rao MD 2
  • 3. Section 5 (a)(1) of the OSH Act states Protects Health care Workers • Section 5 (a)(1) of the OSH Act states: • “Each employer shall furnish to each of his employees employment and a place of employment which are free from recognized hazards that are causing or are likely to cause death or serious physical harm to his employees.” 3/30/2018 Dr.T.V.Rao MD 3
  • 4. Where Is TB Found in the Workplace? •Healthcare Facilities •Correctional Institutions •Homeless Shelters •Long-term Care Facilities for the Elderly •Drug Treatment Centers •DIAGNOSTIC LABORATORIES 3/30/2018 Dr.T.V.Rao MD 4
  • 5. Feasible and Useful TB Abatement Methods • Protocol for the early identification of individuals with active tuberculosis • Medical surveillance • Case management of infected employees • Worker training and education • Engineering controls 3/30/2018 Dr.T.V.Rao MD 5
  • 6. Biosafety Levels • Laboratory workers who handle infectious materials in the microbiology laboratory should be aware of the work practices, safety equipment, and barriers that will protect them, and others in the area, from infectious agents 3/30/2018 Dr.T.V.Rao MD 6
  • 7. BIOSAFETY AIMS AT •Biosafety also aims at preventing unintentional exposure to pathogens or their accidental release 3/30/2018 Dr.T.V.Rao MD 7
  • 8. RISK OF TUBERCULOSIS TO TECHNICIANS • Infections with M. tuberculosis are a proven risk to laboratory personnel as well as others who may be exposed to infectious aerosols generated by certain procedures. 3/30/2018 Dr.T.V.Rao MD 8
  • 9. Increased risk of infection to laboratory staff • Risk of infection with M. tuberculosis is 3x to 9x higher for TB lab workers than for other lab workers • Infection often results from unrecognized production of infectious aerosols containing tubercle bacilli • Infection can occur from needle sticks, through broken skin, etc 3/30/2018 Dr.T.V.Rao MD 9
  • 10. Laboratory personal should formulate biosafety to meet the local needs in the Laboratory • The biosafety level assigned to the specific work being done is driven by professional judgement based on an assessment of the risk rather than by automatic assignment of a laboratory biosafety level according to the particular risk group assigned to a pathogenic agent 3/30/2018 Dr.T.V.Rao MD 10
  • 11. TYPES OF RISK IN THE LABORATORY WORKING with TUBERCULOSIS SPECIMENS •1. Direct microscopy – minimal risk 2. Processing specimens – moderate risk 3. Manipulating cultures – high risk 3/30/2018 Dr.T.V.Rao MD 11
  • 12. Key Recommendations working with Tuberculosis specimens •Key Recommendations: include 4 main protocols 1Work can be done on an open bench 2Access to the laboratory needs to be restricted 3 Separate bench for smear-preparation required Adequately ventilated laboratory with 6-12 air changes per hour (ACH) with unidirectional airflow with either natural or mechanical ventilation . 4 Proper disposal of infectious material 3/30/2018 Dr.T.V.Rao MD 12
  • 14. Biosafety Level Criteria and Requirements for Handling Specimens Suspected of Containing Mycobacterium tuberculosis •All specimens suspected of containing M. tuberculosis (including specimens processed for other microorganisms) should be handled in a biological safety cabinet (BSC). 3/30/2018 Dr.T.V.Rao MD 14
  • 15. USE OF PERSONAL EQUIPMENT •Appropriate personal protective equipment (PPE) must be used. At a minimum, this includes gloves and fluid-resistant laboratory coat or gown. 3/30/2018 Dr.T.V.Rao MD 15
  • 16. Biosafety Levels (BSL) • Conditions under which an infectious agent can ordinarily be safely handled. Conditions are a combination of: laboratory practices and techniques safety equipment laboratory facilities Recommended BSLs for many of the infectious agents have been developed • But different methods for the same agent may require different BSLs 3/30/2018 Dr.T.V.Rao MD 16
  • 17. Risk Assessments for TB Procedures •Based on likelihood of producing infectious aerosols and the concentration of bacilli •Limited risk for infectious aerosols direct AFB smear microscopy Moderate risk for infectious aerosols processing sputum specimens High risk for infectious aerosols processing cultures and suspension 3/30/2018 Dr.T.V.Rao MD 17
  • 18. Using biological safety cabinets • Laboratory-acquired infections often result from the unrecognized production of infectious aerosols containing tubercle bacilli. For laboratories conducting TB testing, the most important hazard (or risk) is the generation of infectious aerosols since infection with TB 3/30/2018 Dr.T.V.Rao MD 18
  • 19. Making the smears for detection of Mycobacterium • Non-aerosol-producing manipulations (eg, preparing direct smears for acid-fast staining when done in conjunction with training and periodic checking of competency) can be performed using biosafety level-2 (BSL-2) practices and procedures, containment equipment, and facilities. 3/30/2018 Dr.T.V.Rao MD 19
  • 20. Safety level 3 practices in Tuberculosis specimens • SL-3 practices, safety equipment, and facility design and construction are applicable to microbiology laboratories that work with indigenous or exotic agents with a potential for respiratory transmission, and which may cause serious and potentially lethal infection. If the laboratory is propagating and manipulating cultures for M. tuberculosis,3/30/2018 Dr.T.V.Rao MD 20
  • 21. Safety level 3 practices in Tuberculosis specimens • BSL-3 practices, containment equipment, and facilities are required. Barriers include controlled access to the laboratory and ventilation requirements that minimize the release of infectious aerosols from the laboratory. Secondary barriers should include self-closing double-door access and negative airflow into the laboratory. Exhausted air must not be recirculated. 3/30/2018 Dr.T.V.Rao MD 21
  • 22. AEROSALS ARE HIGHLY INFECTIVE •Mycobacterium tuberculosis occurs primarily through the inhalation of infectious aerosols, although it can also occur through direct inoculation or ingestion. 3/30/2018 Dr.T.V.Rao MD 22
  • 23. Generation of Aerosols with Tuberculosis • Infectious aerosols may be generated during the manipulation of liquids containing tubercle bacilli. After settling on surfaces, droplet nuclei are not reaerosolized and are considered non-infectious • Note . • That is, M. tuberculosis bacteria are usually transmitted only through air, not by surface contact 3/30/2018 Dr.T.V.Rao MD 23
  • 24. Direct AFB Smear Microscopy •Limited risk of generating infectious aerosols •Work can be done on an open bench restricted access to the laboratory separate bench for smear preparation 3/30/2018 Dr.T.V.Rao MD 24
  • 25. Direct AFB Smear Microscopy•Adequately ventilated laboratory 6–12 ACH, directional air flow natural or mechanical ventilation Proper disposal of infectious material 3/30/2018 Dr.T.V.Rao MD 25
  • 26. Processing Sputum Specimens for Smear, Culture, Molecular Tests – 1 •Moderate risk of generating infectious aerosols during specimen manipulation Laboratories must have restricted access and be separated from public areas •Impermeable surfaces for easy cleaning •Air flows into lab without re-circulation to non-lab areas (directional airflow)6–12 ACH, closed windows •Proper disposal of infectious material 3/30/2018 Dr.T.V.Rao MD 26
  • 27. Processing Sputum Specimens for Smear, Culture, Molecular Tests – 2 • Class I or II Biosafety Cabinets used for all open manipulation of agents BSCs must be properly installed and certified at least annually • BSC exhaust may be ducted to outside using a hard duct or thimble fitting (preferred) recirculated into the room if assured that the BSC is functioning properly • Use aerosol-containment rotors 3/30/2018 Dr.T.V.Rao MD 27
  • 28. TB and Respiratory Protection • NIOSH certifies three categories of non-powered air purifying respirators based on filtering efficiency. All three categories are acceptable for use against TB: • Type 100 (99.97% efficient) • Type 99 (99% efficient) • Type 95 (95% efficient) 3/30/2018 Dr.T.V.Rao MD 28
  • 29. TB Laboratory Biosafety Gaps • What are minimum facility requirements? • U.S./European-style BSL3? containment room, airflow, BSC? • What are suitable laboratory layouts? • What are minimum safety requirements for technicians who are HIV+? • for areas with high rates of MDR/XDR TB? • When should respirators be required? • Are Class I BSCs adequate? • How to ensure functioning BSCs? 3/30/2018 Dr.T.V.Rao MD 29
  • 30. CURRENT CONCERNS WITH MDR TB and XDR TB 3/30/2018 Dr.T.V.Rao MD 30
  • 32. What is XDR TB • XDR TB stems from poor general TB control and the consequent development of multidrug- resistant TB (MDR TB). The current definition of XDR TB is “XDR TB is TB showing resistance to at least rifampicin and isoniazid, which is the definition of MDR TB, in addition to any fluoroquinolone, and to at least 1 of the 3 following injectable drugs used in anti-TB treatment: capreomycin, kanamycin and amikacin.” 3/30/2018 Dr.T.V.Rao MD 32
  • 33. emergence of XDR TB is The emergence of XDR TB is a recent phenomenon; evidence indicating that XDR TB may be a much higher risk organism from a laboratory safety perspective may yet emerge. In that event, laboratory facilities must reevaluate their own site-specific risk assessments in order to determine if additional safety measures. 3/30/2018 Dr.T.V.Rao MD 33
  • 34. Laboratory Safety Working with XDR TB • Like other strains of M. tuberculosis, XDR tubercle bacilli may be present in sputum, gastric lavage fluids, cerebrospinal fluid, urine, and in a variety of tissues. 2 Exposure to laboratory-generated aerosols is the most important hazard encountered. Tubercle bacilli may survive in heat-fixed smears and may be aerosolized in the preparation of frozen sections and during manipulation of liquid cultures. Because of the low infective dose of M. tuberculosis (i.e., ID50 <10 bacilli), sputa and other clinical specimens from suspected or known cases of tuberculosis must be considered potentially infectious and handled with appropriate precautions. Accidental needle-sticks are also a recognized hazard. 3/30/2018 Dr.T.V.Rao MD 34
  • 36. Laboratory activities with known XDR TB strains • Research activities on XDR TB strains, especially protocols involving aerosolization of infectious materials, should only be undertaken if absolutely necessary. Researchers and institutions should review protocols to determine if less resistant strains of M. tuberculosis can be used instead of XDR TB strains. 3/30/2018 Dr.T.V.Rao MD 36
  • 37. Using Disinfectants in tuberculosis • Work surfaces must be decontaminated, using the laboratory-approved disinfectant, upon completion of procedures, immediately following a spill, and at the end of the work shift, if the surface was re contaminated since the last cleaning. Laboratory equipment should be routinely decontaminated. 3/30/2018 Dr.T.V.Rao MD 37
  • 38. HAND WASHING A GREAT ACT TO PREVENT SPREAD OF INFECTIONS INCLDUING TB •Hands must be washed upon completion of work with potentially infectious materials and before leaving the laboratory. 3/30/2018 Dr.T.V.Rao MD 38
  • 39. STOPPING TB A GREAT PRIORITY 3/30/2018 Dr.T.V.Rao MD 39
  • 40. References •Reference: CDC website. Available at: •https://www.cdc.gov/tb/topic/laboratory/bi osafetyguidance_xdrtb.htm. Accessed November 29, 2017. •Public health Resources on Tuberculois •Google resources 3/30/2018 Dr.T.V.Rao MD 40
  • 41. •Program Created by Dr.T.V.Rao MD for benefit of laboratory manpower to prevent and control spread of TB in Health care •Email •doctortvrao@gmail.com 3/30/2018 Dr.T.V.Rao MD 41