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Tomasz Adamusiak MD PhD [email_address] Integrated programming toolkit for  common  ontology  application tasks EBI  is an Outstation of the European Molecular Biology Laboratory.
...and no huffing and puffing will blow all of them down... ,[object Object],[object Object],[object Object],  Leonard Leslie Brooke  (1904)
EBI Ontology Lookup Service ,[object Object],[object Object],[object Object],[object Object]
NCBO BioPortal ,[object Object],[object Object],[object Object],[object Object],[object Object]
OLS vs BioPortal (July, 2010)
INTEGRATION IS HARD
OWL API ,[object Object],[object Object],[object Object],[object Object],[object Object]
It is not a meta-service... ,[object Object],[object Object],[object Object],....but could be used to build one
The most important slide  ontocat.org searchAll() searchOntology() getChildren() getParents() getSynonyms() getDefinitions() getParents() ...
Where’s my bacon? ,[object Object],[object Object],[object Object],[object Object]
Google: biomed central ontocat
Acknowledgments ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Special thanks go to NCBO BioPortal and EBI OLS support teams for all the comprehensive help they provide OntoCAT logo courtesy of Eamonn Maguire This work was supported by the European Community's Seventh Framework Programmes GEN2PHEN [grant number 200754], SLING [grant number 226073], and SYBARIS [grant number 242220], the European Molecular Biology Laboratory, the Netherlands Organisation for Scientific Research [NWO/Rubicon grant number 825.09.008], and the Netherlands Bioinformatics Centre [BioAssist/Biobanking platform and BioRange grant SP1.2.3]

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G03-SemanticWeb-OntoCAT

Editor's Notes

  1. Created in VennMaster on July 2010