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Liquid Biopsies
Babu Appat
Researchers have long dreamed of
developing simple blood tests to monitor
and diagnose solid tumours, but the
scarcity of circulating cancer biomarkers
has held the field back. Highly sensitive
assays and innovative strategies are
finally changing that, and bringing a new
era of liquid biopsies closer than ever.
Beginning to circulate
Tumour biopsies are among the most
cumbersome, risky, and expensive
tests in all of medicine, so it’s no
surprise that researchers have been
trying for decades to improve them.
While more sensitive assays have
enabled doctors to take smaller
samples of some types of solid
tumours, oncologists have long
dreamed of avoiding traditional
biopsies altogether.
Tumours often shed cells and
subcellular components into the
bloodstream, but these are
exceedingly hard to detect.
Even in advanced diseases, the
background level of healthy cells and
free biomolecules remains several
orders of magnitude higher than the
signals from most tumours.
Using novel purification and
analytical techniques, though,
investigators are now pushing
several types of liquid biopsies
toward the clinic.
The field segregates into three
major strategies: detecting free
nucleic acids, isolating intact
circulating tumour cells, and
identifying extracellular vesicles
from tumours.
Each comes with its own
advantages and drawbacks. With a
few liquid biopsies already
approved for clinical use and many
more in clinical trials, experts in
the field agree that the approach is
on the cusp of a major
breakthrough.
Tiny reactions, big impact
Of the three methods, nucleic
acid–based liquid biopsies appear
to be taking an early lead.
He explains that DNA-based liquid
biopsies typically use standard
blood collection tubes, and those
based on polymerase chain
reaction (PCR) are particularly easy
for clinical laboratorians to
understand and implement.
Each comes with its own
advantages and drawbacks. With a
few liquid biopsies already
approved for clinical use and many
more in clinical trials, experts in
the field agree that the approach is
on the cusp of a major
breakthrough.
Paweletz and his colleagues are
now developing a PCR-based test
to detect drug resistance
mutations in lung tumours.
The test can be performed from a
standard blood sample in just two
days, and identifies any of three
mutations covering 40 per cent of
all lung cancer patients.
The team is now building on actual
clinical experience with approved
liquid biopsies to identify the
assays oncologists will find most
useful.
Geoff Oxnard, an assistant professor of
medicine at Harvard Medical School in
Boston and one of Paweletz’s
collaborators, remarks that “I had a
hospitalized patient last week, she’s sick
with metastatic lung cancer, and she’s
exactly the kind of patient who might
have an [epithelial growth factor receptor
(EGFR)] mutation, but I simply didn’t have
enough tissue to ask those questions
yet.”
He says that using the cobas EGFR
Mutation Test v2, a liquid biopsy from
Roche in Pleasanton, California, which
was recently approved by the U.S.
Food and Drug Administration, he was
able to determine that the patient did
indeed have the mutation, making her
a good candidate for drugs that target
it.
“Circulating tumour cells have the
advantage that they are ... intact
living cells.” – Michael Kazinski,
Qiagen
For further reading go to:
http://www.sciencemag.org/features/2017/10/pumping-liquid-
biopsies-0?et_rid=44259063&et_cid=1615292
Knowledge is power;
Add a whetting skill too to it.
Wisdom will come to you
and stay with you.
THANK YOU
babuappat@gmail.com

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Liquid biopsies- Learn about the newer ways of diagnosing malignancy

  • 2. Researchers have long dreamed of developing simple blood tests to monitor and diagnose solid tumours, but the scarcity of circulating cancer biomarkers has held the field back. Highly sensitive assays and innovative strategies are finally changing that, and bringing a new era of liquid biopsies closer than ever.
  • 3. Beginning to circulate Tumour biopsies are among the most cumbersome, risky, and expensive tests in all of medicine, so it’s no surprise that researchers have been trying for decades to improve them.
  • 4. While more sensitive assays have enabled doctors to take smaller samples of some types of solid tumours, oncologists have long dreamed of avoiding traditional biopsies altogether.
  • 5. Tumours often shed cells and subcellular components into the bloodstream, but these are exceedingly hard to detect.
  • 6. Even in advanced diseases, the background level of healthy cells and free biomolecules remains several orders of magnitude higher than the signals from most tumours.
  • 7. Using novel purification and analytical techniques, though, investigators are now pushing several types of liquid biopsies toward the clinic.
  • 8. The field segregates into three major strategies: detecting free nucleic acids, isolating intact circulating tumour cells, and identifying extracellular vesicles from tumours.
  • 9. Each comes with its own advantages and drawbacks. With a few liquid biopsies already approved for clinical use and many more in clinical trials, experts in the field agree that the approach is on the cusp of a major breakthrough.
  • 10. Tiny reactions, big impact Of the three methods, nucleic acid–based liquid biopsies appear to be taking an early lead.
  • 11. He explains that DNA-based liquid biopsies typically use standard blood collection tubes, and those based on polymerase chain reaction (PCR) are particularly easy for clinical laboratorians to understand and implement.
  • 12. Each comes with its own advantages and drawbacks. With a few liquid biopsies already approved for clinical use and many more in clinical trials, experts in the field agree that the approach is on the cusp of a major breakthrough.
  • 13. Paweletz and his colleagues are now developing a PCR-based test to detect drug resistance mutations in lung tumours.
  • 14. The test can be performed from a standard blood sample in just two days, and identifies any of three mutations covering 40 per cent of all lung cancer patients.
  • 15. The team is now building on actual clinical experience with approved liquid biopsies to identify the assays oncologists will find most useful.
  • 16. Geoff Oxnard, an assistant professor of medicine at Harvard Medical School in Boston and one of Paweletz’s collaborators, remarks that “I had a hospitalized patient last week, she’s sick with metastatic lung cancer, and she’s exactly the kind of patient who might have an [epithelial growth factor receptor (EGFR)] mutation, but I simply didn’t have enough tissue to ask those questions yet.”
  • 17. He says that using the cobas EGFR Mutation Test v2, a liquid biopsy from Roche in Pleasanton, California, which was recently approved by the U.S. Food and Drug Administration, he was able to determine that the patient did indeed have the mutation, making her a good candidate for drugs that target it.
  • 18. “Circulating tumour cells have the advantage that they are ... intact living cells.” – Michael Kazinski, Qiagen
  • 19. For further reading go to: http://www.sciencemag.org/features/2017/10/pumping-liquid- biopsies-0?et_rid=44259063&et_cid=1615292
  • 20. Knowledge is power; Add a whetting skill too to it. Wisdom will come to you and stay with you.