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18.03.2016
BiOutils: biology for everyone!
Massimo Caine
11th Scientix Projects’ Networking Event
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
The challenges of
teaching Biology
…the support of an interface is needed!
Biological research
respecting the
state-of-the-art
adapting to the
high pace
Lab tools
the material is
expensive
Biological samples
difficulties of
storing conditions
Literature Teachers’ questions
need for a centralized
information
Setting up the interface « BiOutils »
contraction of bio and outils (tools) – pronounced « beauty »
April
2006
December
2006
Discussion with the
Academic environment
June
2006
Survey
sent to teachers
September
2006
Introducing BiOutils
to teachers
“This is exactly what we need!”
December
2006
Workshop for teachers
presenting BiOutils scopes
Discussion with teachers. Definition of
needs and expectations.
January
2007
BiOutils website designed in
collaboration with teachers
Built according to the needs of
teachers and academic possibilities
http://bioutils.ch
March
2007
Official launch of
BiOutils 2015
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
Research
SCHOOLS
Biology: primary and
secondary education
Section
of Biologie
Faculty
of Medicine
BiOutils: an integrated platform
http://bioutils.ch
Support and promote the teaching of modern biology providing equipment
and know-how to public and private schools
MISSION
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
Yeast cell counting
Restriction enzymes
Gram staining
Bacteria transf.
Gene cloning
Gene retro-inhibition
UV mutagenesis
PCR reaction
DNA extraction
Microorganism detect.
Build a DNA molecule
Cells and DNA
Water analysis
ELISA test
Photosynthesis
Solubility
Antibiotics
Trivial Evolution
Molecular
phylogenetic
Bacteriophages
Bacterial conjugation
Biological pigments
Meteo
The mysterious fly
Trivial evolution:
plants
High schools
Middle schools
Elementary schools
http://www.bioutils.ch
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
Yeast cell
counting
0,7 g in 10 mL
Dil 100X 100X 10X 10X
Sterile plastic pipettes
Propipettes
Automatic pipettes P200
Test tubes (sterile)
Dilution tubes rack
Thoma cell counter
Pipettes Pasteurs
Material provided
Micropipettes P1000
Special waste bag
Sterile H20 (for dilutions)
Sterile tips
Yeast petri dishes
Vortex
Pedagogical value
Different measuring methods
Working in sterile conditions
Small biological organisms
Big numbers
Growing colony from single cell
WINNER
1st Prize
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
Peer-reviewed pedagogical journals publishing
Learning objectives:
1. Visualize and explore the double strand structure of DNA
2. Experience first-hand the mechanisms of DNA replication
3. Describe the relationship between DNA and genetic traits
4. Apply the learned concepts to further experiences
Caine et al., 2015
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
BiOutils, an interface to connect university laboratories with microbiology
classes in schools
Caine M., Zuchuat S., Weber A., Ducret V., Linder P, and Perron K.
Scientific peer-reviewed publishing
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
Experiments
&
Material
Questions High school
thesis
Laboratory
visits
Events Stages Developing
new ad hoc
experiments
Professional
courses
GATEWAY TOWARDS UNIVERSITY
Primary
schools
Secondary
schools
Broad
public
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
From the BiOutils activity report 2013-2014
BiOutils: an established and versatile approach…
Number of students participating to
BiOutils activities
…and contagious!
Geneva Bellinzona
.
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
BiOutils a pioneer platform of the ScienScope
2007 2008 2011
201420142015
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
0
10
20
30
40
50
60
70
80
90
100
1 2 3 4
Percentagefrequency
n=43
m.=3,7
md.=4
s.=0,6
ab.=2
A
0
10
20
30
40
50
60
70
80
90
100
1 2 3 4
Percentagefrequency
B
n=42
m.=3,5
md.=4
s.=0,67
ab.=2
0
10
20
30
40
50
60
70
80
90
100
1 2 3 4
Percentagefrequency
C
n=38
m.=3,26
md.=3
s.=0,69
ab.=4
D
0
10
20
30
40
50
60
70
80
90
100
1 2 3 4
Percentagefrequency
n=50
m.=3,9
md.=4
s.=0,46
 Do the BiOutils classroom experiences increase the interest of students for the topic?
 Do the BiOutils classroom experiences make easier the understanding of the topic?
 Is the number of experiences proposed by BiOutils sufficient for your needs?
 Do you think that is important that a structure like BiOutils, fully integrated in a research laboratory, is
maintained and developed further?
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
Caine et al., 2015b
Patrick Linder
Professeur
Dpt de Microbiologie et Médecine
Moléculaire
Faculté de Médecine
Université de Genève
Karl Perron
Chargé d’enseignement
Unité de microbiologie
Faculté des Sciences
Université de Genève
THE TEAM
HEAD UNIT TEAM
Sandrine Zuchuat
Aurélia Weber
Véréna Ducret
Massimo Caine
…and the lab research team!
ACKNOWLEDGMENTS
http://bioutils.ch
Mauro Tonolla
Cristina Corti-Fragoso
SUPSI - Ticino
SUPSI - Ticino
Making Biology
accessible for
everyone!
The End
bioutils@unige.ch
BiOutils: biology for everyone! SCIENTIX – Bruxelles, 17.03.2016
TLC silica plates
Micropipettes P1000
Micropipettes P20
Sterile tips
Plastic tubes 15 mL
Tube rack
Material provided
Trivial Evolution
Les plantes
Game surface 3mt x 3mt
Mousse dice
Coloured pawns
Species’ cards
Questions’ cards
Pedagogical book
Games instructions
Material provided
Ethanol 100%
TLC block
Solvent mix
Balance
Pedagogical value
Pedagogical value
Photosynthesis
Biological pigments
Evolution
Endosymbiosis
Evolution
Species
Taxonomical class.
Phylogenies
Biodiversity
Vitamins
Chromatography
Polarity
Developed by:
Systematic
Morphological characteristic
Genetic
Domestication
Pigments of Life
BiOutils: biology for everyone! 11th SPNE – Bruxelles, 17.03.2016
BiOutils: biology for everyone! PSS – 07.09.2015
Public outdoor outreach activities
Microbiological path – Val Piora, Ticino:
ODK: a collaboration with the national television
Series of 10min episodes for kids, addressing and explaining the most diverse
scientific questions from chemistry, physics and biology.
Gravitropism explained The plants that move
BiOutils: biology for everyone! PSS – 07.09.2015

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BiOutils: biology for all

  • 1. 18.03.2016 BiOutils: biology for everyone! Massimo Caine 11th Scientix Projects’ Networking Event
  • 2. BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016 The challenges of teaching Biology …the support of an interface is needed! Biological research respecting the state-of-the-art adapting to the high pace Lab tools the material is expensive Biological samples difficulties of storing conditions Literature Teachers’ questions need for a centralized information
  • 3. Setting up the interface « BiOutils » contraction of bio and outils (tools) – pronounced « beauty » April 2006 December 2006 Discussion with the Academic environment June 2006 Survey sent to teachers September 2006 Introducing BiOutils to teachers “This is exactly what we need!” December 2006 Workshop for teachers presenting BiOutils scopes Discussion with teachers. Definition of needs and expectations. January 2007 BiOutils website designed in collaboration with teachers Built according to the needs of teachers and academic possibilities http://bioutils.ch March 2007 Official launch of BiOutils 2015 BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 4. Research SCHOOLS Biology: primary and secondary education Section of Biologie Faculty of Medicine BiOutils: an integrated platform http://bioutils.ch Support and promote the teaching of modern biology providing equipment and know-how to public and private schools MISSION BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 5. Yeast cell counting Restriction enzymes Gram staining Bacteria transf. Gene cloning Gene retro-inhibition UV mutagenesis PCR reaction DNA extraction Microorganism detect. Build a DNA molecule Cells and DNA Water analysis ELISA test Photosynthesis Solubility Antibiotics Trivial Evolution Molecular phylogenetic Bacteriophages Bacterial conjugation Biological pigments Meteo The mysterious fly Trivial evolution: plants High schools Middle schools Elementary schools http://www.bioutils.ch BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 6. Yeast cell counting 0,7 g in 10 mL Dil 100X 100X 10X 10X Sterile plastic pipettes Propipettes Automatic pipettes P200 Test tubes (sterile) Dilution tubes rack Thoma cell counter Pipettes Pasteurs Material provided Micropipettes P1000 Special waste bag Sterile H20 (for dilutions) Sterile tips Yeast petri dishes Vortex Pedagogical value Different measuring methods Working in sterile conditions Small biological organisms Big numbers Growing colony from single cell WINNER 1st Prize BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 7. Peer-reviewed pedagogical journals publishing Learning objectives: 1. Visualize and explore the double strand structure of DNA 2. Experience first-hand the mechanisms of DNA replication 3. Describe the relationship between DNA and genetic traits 4. Apply the learned concepts to further experiences Caine et al., 2015 BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 8. BiOutils, an interface to connect university laboratories with microbiology classes in schools Caine M., Zuchuat S., Weber A., Ducret V., Linder P, and Perron K. Scientific peer-reviewed publishing BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 9. Experiments & Material Questions High school thesis Laboratory visits Events Stages Developing new ad hoc experiments Professional courses GATEWAY TOWARDS UNIVERSITY Primary schools Secondary schools Broad public BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 10. From the BiOutils activity report 2013-2014 BiOutils: an established and versatile approach… Number of students participating to BiOutils activities …and contagious! Geneva Bellinzona . BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 11. BiOutils a pioneer platform of the ScienScope 2007 2008 2011 201420142015 BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016
  • 12. 0 10 20 30 40 50 60 70 80 90 100 1 2 3 4 Percentagefrequency n=43 m.=3,7 md.=4 s.=0,6 ab.=2 A 0 10 20 30 40 50 60 70 80 90 100 1 2 3 4 Percentagefrequency B n=42 m.=3,5 md.=4 s.=0,67 ab.=2 0 10 20 30 40 50 60 70 80 90 100 1 2 3 4 Percentagefrequency C n=38 m.=3,26 md.=3 s.=0,69 ab.=4 D 0 10 20 30 40 50 60 70 80 90 100 1 2 3 4 Percentagefrequency n=50 m.=3,9 md.=4 s.=0,46  Do the BiOutils classroom experiences increase the interest of students for the topic?  Do the BiOutils classroom experiences make easier the understanding of the topic?  Is the number of experiences proposed by BiOutils sufficient for your needs?  Do you think that is important that a structure like BiOutils, fully integrated in a research laboratory, is maintained and developed further? BiOutils: biology for everyone! 11th SPNE – Bruxelles, 18.03.2016 Caine et al., 2015b
  • 13. Patrick Linder Professeur Dpt de Microbiologie et Médecine Moléculaire Faculté de Médecine Université de Genève Karl Perron Chargé d’enseignement Unité de microbiologie Faculté des Sciences Université de Genève THE TEAM HEAD UNIT TEAM Sandrine Zuchuat Aurélia Weber Véréna Ducret Massimo Caine …and the lab research team! ACKNOWLEDGMENTS http://bioutils.ch Mauro Tonolla Cristina Corti-Fragoso SUPSI - Ticino SUPSI - Ticino
  • 15. BiOutils: biology for everyone! SCIENTIX – Bruxelles, 17.03.2016
  • 16. TLC silica plates Micropipettes P1000 Micropipettes P20 Sterile tips Plastic tubes 15 mL Tube rack Material provided Trivial Evolution Les plantes Game surface 3mt x 3mt Mousse dice Coloured pawns Species’ cards Questions’ cards Pedagogical book Games instructions Material provided Ethanol 100% TLC block Solvent mix Balance Pedagogical value Pedagogical value Photosynthesis Biological pigments Evolution Endosymbiosis Evolution Species Taxonomical class. Phylogenies Biodiversity Vitamins Chromatography Polarity Developed by: Systematic Morphological characteristic Genetic Domestication Pigments of Life BiOutils: biology for everyone! 11th SPNE – Bruxelles, 17.03.2016
  • 17. BiOutils: biology for everyone! PSS – 07.09.2015 Public outdoor outreach activities Microbiological path – Val Piora, Ticino:
  • 18. ODK: a collaboration with the national television Series of 10min episodes for kids, addressing and explaining the most diverse scientific questions from chemistry, physics and biology. Gravitropism explained The plants that move BiOutils: biology for everyone! PSS – 07.09.2015

Editor's Notes

  1. La natura microscopica del lievito – Stima cellule yeast cube Pedagogical value