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18  www.aiche.org/cep  May 2016  CEP
Catalyzing Commercialization
This article was prepared by the National Science Foundation in partnership with CEP.
Biocatalysis, the use of enzymes to
perform synthetic chemistry, has
grown in significance. Today, enzymes
are becoming part of the essential
toolbox for the industrial synthesis of
high-purity chemicals.
	 Merck & Co. and Codexis pio-
neered industrial biocatalysis for
pharma­ceuticals with a biosynthetic
route to produce sitagliptin, the active
ingredient in one of Merck’s anti­
diabetes drugs, eliminating transition-
metal-catalyzed, high-pressure hydro-
genation and chiral purification steps.
The new process had 56% higher
productivity and 13% higher yield, and
generated 19% less waste than the orig-
inal process. In the past 10 years, the
industry has similarly engineered more
than 40 new enzymes for key synthesis
steps to lower the cost and environmen-
tal impact of drug production.
	 However, enzymes cannot always
compete economically with traditional
chemistry and inorganic catalysts. For
commercial-scale processes, enzymes
are often immobilized on solid sup-
ports so that they can be reused. But
enzyme immobilization methods can
have significant drawbacks: They are
not universal for all enzymes, have poor
immobilization yield, drastically reduce
enzyme activity, and can involve the
use of expensive support materials.
	 If done effectively, though, immo-
bilization can be advantageous. Bio-
catalysts are often more stable when
they are immobilized. For example,
they can tolerate organic solvents and
higher temperatures, and can be used
and reused efficiently over multiple
synthesis cycles.
	 “Although many examples of
enzyme immobilization exist, a
general methodology has yet to be
developed,” says Matthew D. Truppo,
head of chemical biotechnology at
Merck. “The development of a general
immobilization protocol that can be
applied readily and inexpensively
across multiple enzyme classes is of
great interest,” Truppo says.
	 ZYMtronix, an Ithaca, NY-based
spinout from Cornell Univ., has devel-
oped a universal method and associated
materials that address the shortcomings
of today’s enzyme immobilization tech-
niques. The method involves magnetic
nanoparticles (5–10-nm dia.) that
self-assemble into magnetic clusters to
permanently entrap and stabilize the
enzymes. The enzyme-cluster combi-
nations may be magnetically coupled
with a magnetic macroporous carrier
(support) for ease of use.
	 “Our platform is universal and
allows for quick customization of
magnetic carriers around any wild-
type or engineered enzymes, or their
combinations, while ensuring the high-
est activities,” says Stéphane Corgié,
CEO of ZYMtronix.
	 The company approaches enzyme
immobilization in three steps. Because
each enzyme is unique, the first step is
a quick optimization to find the right
enzyme-to-nanoparticle ratio to form
the clusters. The second step involves
screening the clusters to identify the
immobilized enzymes with the highest
activities. Once identified, enzyme-
cluster candidates are assembled with
the magnetic carriers and produced at
the volume needed to meet a client’s
needs. In the final step, ZYMtronix
develops and provides the client fitted
magnetic tools for their equipment to
mix, capture, and recycle the enzyme-
cluster-carrier assemblies.
	 ZYMtronix has successfully
applied its immobilization technique to
more than 40 enzyme systems, with no
reductions in enzyme activity, at load-
ings above 20 wt% (weight of enzyme
to weight of carrier). For comparison,
competing immobilization technolo-
gies seldom reach enzyme loadings of
10%, and activities typically decrease
by as much as 80%.
	 With support from the National
Science Foundation, ZYMtronix has
scaled up its process to grams of immo-
bilized enzymes per day, and has dem-
onstrated the use of the immobilized
enzymes in both batch and continuous
processes. To accelerate the adoption
of its technology, the company recently
launched rapid magnetic optimiza-
tion kits. The kits come in a 96-well
microplate format and are loaded with
the client’s immobilized enzymes to
be tested on their substrates of choice.
The kits can be adapted for synthetic
biology involving synthesis with mul-
tiple enzyme systems.
	 The company is currently in dis-
cussions with strategic partners to test
the technology at larger scales.
Magnetic Enzyme Immobilization
Set to Unlock the Power of Biocatalysis
This technology was funded through the NSF
Small Business Innovation Research Program.
p A scanning electron micrograph of a magnetic
particle of ZYMtronix’s new ZYM-MAG material
reveals the hierarchical structure of the macro­
porous enzyme carrier. Even the finest ZYM-MAGs
(< 200-µm size fraction, shown in the vial) can be
captured in seconds by external magnetic fields
(here, a magnet on the side of the vial) thanks to
their high magnetic susceptibility.
0 sec
1 sec
2 sec
3 sec
50 m
CEP

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ZYM CEP paper

  • 1. 18  www.aiche.org/cep  May 2016  CEP Catalyzing Commercialization This article was prepared by the National Science Foundation in partnership with CEP. Biocatalysis, the use of enzymes to perform synthetic chemistry, has grown in significance. Today, enzymes are becoming part of the essential toolbox for the industrial synthesis of high-purity chemicals. Merck & Co. and Codexis pio- neered industrial biocatalysis for pharma­ceuticals with a biosynthetic route to produce sitagliptin, the active ingredient in one of Merck’s anti­ diabetes drugs, eliminating transition- metal-catalyzed, high-pressure hydro- genation and chiral purification steps. The new process had 56% higher productivity and 13% higher yield, and generated 19% less waste than the orig- inal process. In the past 10 years, the industry has similarly engineered more than 40 new enzymes for key synthesis steps to lower the cost and environmen- tal impact of drug production. However, enzymes cannot always compete economically with traditional chemistry and inorganic catalysts. For commercial-scale processes, enzymes are often immobilized on solid sup- ports so that they can be reused. But enzyme immobilization methods can have significant drawbacks: They are not universal for all enzymes, have poor immobilization yield, drastically reduce enzyme activity, and can involve the use of expensive support materials. If done effectively, though, immo- bilization can be advantageous. Bio- catalysts are often more stable when they are immobilized. For example, they can tolerate organic solvents and higher temperatures, and can be used and reused efficiently over multiple synthesis cycles. “Although many examples of enzyme immobilization exist, a general methodology has yet to be developed,” says Matthew D. Truppo, head of chemical biotechnology at Merck. “The development of a general immobilization protocol that can be applied readily and inexpensively across multiple enzyme classes is of great interest,” Truppo says. ZYMtronix, an Ithaca, NY-based spinout from Cornell Univ., has devel- oped a universal method and associated materials that address the shortcomings of today’s enzyme immobilization tech- niques. The method involves magnetic nanoparticles (5–10-nm dia.) that self-assemble into magnetic clusters to permanently entrap and stabilize the enzymes. The enzyme-cluster combi- nations may be magnetically coupled with a magnetic macroporous carrier (support) for ease of use. “Our platform is universal and allows for quick customization of magnetic carriers around any wild- type or engineered enzymes, or their combinations, while ensuring the high- est activities,” says Stéphane Corgié, CEO of ZYMtronix. The company approaches enzyme immobilization in three steps. Because each enzyme is unique, the first step is a quick optimization to find the right enzyme-to-nanoparticle ratio to form the clusters. The second step involves screening the clusters to identify the immobilized enzymes with the highest activities. Once identified, enzyme- cluster candidates are assembled with the magnetic carriers and produced at the volume needed to meet a client’s needs. In the final step, ZYMtronix develops and provides the client fitted magnetic tools for their equipment to mix, capture, and recycle the enzyme- cluster-carrier assemblies. ZYMtronix has successfully applied its immobilization technique to more than 40 enzyme systems, with no reductions in enzyme activity, at load- ings above 20 wt% (weight of enzyme to weight of carrier). For comparison, competing immobilization technolo- gies seldom reach enzyme loadings of 10%, and activities typically decrease by as much as 80%. With support from the National Science Foundation, ZYMtronix has scaled up its process to grams of immo- bilized enzymes per day, and has dem- onstrated the use of the immobilized enzymes in both batch and continuous processes. To accelerate the adoption of its technology, the company recently launched rapid magnetic optimiza- tion kits. The kits come in a 96-well microplate format and are loaded with the client’s immobilized enzymes to be tested on their substrates of choice. The kits can be adapted for synthetic biology involving synthesis with mul- tiple enzyme systems. The company is currently in dis- cussions with strategic partners to test the technology at larger scales. Magnetic Enzyme Immobilization Set to Unlock the Power of Biocatalysis This technology was funded through the NSF Small Business Innovation Research Program. p A scanning electron micrograph of a magnetic particle of ZYMtronix’s new ZYM-MAG material reveals the hierarchical structure of the macro­ porous enzyme carrier. Even the finest ZYM-MAGs (< 200-µm size fraction, shown in the vial) can be captured in seconds by external magnetic fields (here, a magnet on the side of the vial) thanks to their high magnetic susceptibility. 0 sec 1 sec 2 sec 3 sec 50 m CEP