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Bridging Semantics and Repositories
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Peter McQuiltonFollow
Knowledge Engineer at Oxford e-Research CentreNov. 21, 2019•0 likes•274 views
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Bridging Semantics and Repositories
Nov. 21, 2019•0 likes•274 views
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A 10 minute presentation on the relationship between semantic terminologies and repositories. Presented at the FAIRsFAIR FAIR Semantics & FAIR Repositories pre-RDA P14 meeting in Helsinki, Finland on the 22nd October 2019. FAIRsharing can describe and display these relationships in a way that allows users to understand which standards are most adopted by the community and which terminologies are used by particular repositories across the natural sciences, engineering sciences, social sciences and humanities.
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Bridging Semantics and Repositories
- Bridging semantics and repositories Peter McQuilton, PhD ORCiD: 0000-0003-2687-1982 | Twitter: @Drosophilic Building the data landscape of the future, FAIRsFAIR workshop, Espoo, Finland, 22nd October 2019 Slides: https://datareadiness.eng.ox.ac.uk
- Terminologies are one type of many standards Formats Terminologies Guidelines Identifiers ID Conceptual model, conceptual schema, exchange formats Controlled vocabularies, thesauri, ontologies Minimum information reporting requirements, checklists Unambiguous, persistent and context-independent identifier schema
- Over a thousand standards 390+ 162+ 729+ ~1300 13 MIAME MIRIAM MIQAS MIX MIGEN ARRIVE MIAPE MIASE MIQE MISFISHIE …. REMARK CONSORT SRAxml SOFT FASTA DICOM MzML SBRML SEDML … GELML ISA CML MITAB AAO CHEBIOBI PATO ENVO MOD BTO IDO … TEDDY PRO XAO DO VO EC number URL PURLLSID HandleORCID RRID InChI IVOA ID DOI standard organizations grass-root groups Formats Terminologies Guidelines Identifiers ID COMMUNITY STANDARDS for metadata and identifiers
- Formats Terminologies Guidelines Identifiers ID REPOSITORIES, databases and knowledgebases COMMUNITY STANDARDS for metadata and identifiers Many implemented in repositories
- Formats Terminologies Guidelines Identifiers ID REPOSITORIES, databases and knowledgebases DATA POLICIES by journals, funders, and other organizations To support (re)use of existing data COMMUNITY STANDARDS for metadata and identifiers Identify and recommend
- Formats Terminologies Guidelines Identifiers ID REPOSITORIES, databases and knowledgebases DATA POLICIES by journals, funders, and other organizations But which resource should you choose? COMMUNITY STANDARDS for metadata and identifiers Identify and recommend
- Formats Terminologies Guidelines Identifiers ID REPOSITORIES, databases and knowledgebases DATA POLICIES by journals, funders, and other organizations COMMUNITY STANDARDS for metadata and identifiers informative and educational resource Manually curated inter-linked descriptions
- We guide consumers to discover, select and use these resources with confidence We help producers to make their resources more visible, more widely adopted and cited
- Researchers in academia, industry, government Developers and curators of resources Journal publishers or organizations with data policy Research data facilitators, librarians, trainers Learned societies, unions and associations Funders and data policy makers A flagship output (and a WG) of the: Recommended by funders, e.g.: Core part of implementation networks in:
- Which terminologies are most implemented by repositories
- FAIRsharing – linking semantics, repositories and policies
- datareadiness.eng.ox.ac.uk with developers and curators
- Researchers in academia, industry, government Developers and curators of resources Journal publishers or organizations with data policy Research data facilitators, librarians, trainers Learned societies, unions and associations Funders and data policy makers A flagship output (and a WG) of the: Recommended by funders, e.g.: Core part of implementation networks in:
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