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Bioschemas - TeSS Integration @ Rothamsted Hackathon 2016

Presentation given by Niall Beard in November 2016 at Rothamsted research centre. The presentation is a use case overview of bioschemas (schema.org for science) and how it can be used to structure data included in aggregated registries. The registry is TeSS (https://tess.elixir-uk.org) which collects training events and materials from a distributed heterogeneous collection of sources

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Events, training materials and
integration in TeSS
Niall Beard
Bioschemas Hackathon,
Rothamsted Research Centre
9th November 2016
Quick TeSS Overview
• Aggregation and registration of training events and
materials
• Tools to filter, search, and discover
• Users can organize into packages and training workflows
• Interlinking with other ELIXIR registries
• ELIXIR Node ‘shop window’ view
• https://tess.elixir-uk.org
Aggregation – Not a very API situation
HTML scraper
• Difficult to write.
• - Every site is unique
• - Some have more treacherous HTML
• Very susceptible to change
• - Fixing is re-implementing.
• - Build up of technical debt
http://cdn2.bigcommerce.com/server100/367cc/p
Mark up using schema.org – Google Markup Helper
Mark up using schema.org –Google Markup Helper

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Bioschemas - TeSS Integration @ Rothamsted Hackathon 2016

  • 1. Events, training materials and integration in TeSS Niall Beard Bioschemas Hackathon, Rothamsted Research Centre 9th November 2016
  • 2. Quick TeSS Overview • Aggregation and registration of training events and materials • Tools to filter, search, and discover • Users can organize into packages and training workflows • Interlinking with other ELIXIR registries • ELIXIR Node ‘shop window’ view • https://tess.elixir-uk.org
  • 3. Aggregation – Not a very API situation
  • 4. HTML scraper • Difficult to write. • - Every site is unique • - Some have more treacherous HTML • Very susceptible to change • - Fixing is re-implementing. • - Build up of technical debt http://cdn2.bigcommerce.com/server100/367cc/p
  • 5. Mark up using schema.org – Google Markup Helper
  • 6. Mark up using schema.org –Google Markup Helper
  • 10. Distributed Via TeSS and via widgets embedded in pages Passes to
  • 11. Mark up types • HTML By hand • CMS Extensions – Drupal, Joomla, Wordpress • Github Pages. YAML file -> JSON-LD • Framework Extensions – Ruby on Rails, Django

Editor's Notes

  1. Distributed Research Infrastrtucture. Developing training opportunities across 20+ member nodes Collect and harmonize. Feture rich environment. Connected outwardly to complimentary projects. Promote ELIXIR nodes and keep access to data open to be utilized