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Understanding the epidemiology of African Swine Fever and its impact on smallholders
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Dr. Amy Vincent - H3N2 influenza A virus in swine and the human-animal interfaceDr. Amy Vincent - H3N2 influenza A virus in swine and the human-animal interface
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Understanding the epidemiology of African Swine Fever and its impact on smallholders

  1. Understanding the epidemiology of African Swine Fever and its impact on smallholders Edward Okoth, Jocelyn Davies, Noelina Nantima, Jacqueline Kasiiti, Selestine Naliaka, Tracey May and Richard Bishop | Other team members: Beatrice Abutto, Lorna Atieno, Mike Barongo, Edwina Bochere, Eric Fevre, Samu Machio, Yiheyis Maru, Charles Masembe, Pamela Mulema, Gideon Ndambuki, Milton Ochuka, Edwine Okuge, George Omondi, Esther Omukaga, Cynthia Onzere, Martin Wainana | hub.africabiosciences.org Methods Study area is in a priority region for trans-boundary diseases (TAD) surveillance.. Cross sectional study (July-November 2012) of 683 pig keeping households in 38 villages using a 2-stage cluster sampling design; stratified, randomised. 1100 pigs from surveyed households measured and sampled (blood, serum, faeces). Longitudinal study (December 2012-June 2013) of a sub-sample of 120 households and pigs with repeat samples at 3 months and 6 months. • Opportunistic sampling during ASF outbreaks • Interviews with actors in farmer networks • Focus groups testing preliminary findings • Analyses using complementary tools from molecular biology, veterinary science, mathematics and social science. Results included here are preliminary (May 2013). Improved understanding of African Swine Fever (ASF) outbreaks and impacts is emerging from preliminary analysis of data from our integrated field study (2012/13). This is a foundation for designing interventions to reduce ASF risk among smallholder pig producers. It is also contributing to international effort on vaccine development. Livelihoods 30% of farm households in study area keep pigs. Diagram is aspatial. Arrows show direction of pig trade. Arrow width is proportional to number of pigs traded over 12 months. The circle & triangle at each sampled villagerepresent trade within the village. Field study area Pig trading networks Network diagram of pig trading to and from 4 sampled villages located <5km apart. Key features of pig trading • Most trade is within the same village • 85% of trades are with someone known to the pig owner. • Trades to strangers are more prevalent during ASF outbreaks • Farmers in 10 sampled villages sold pigs across the Uganda-Kenya border. ASF incidence and impact • Farmer interviewees said disease is the biggest risk to their investment in pigs • 90% of farmer interviewees had heard of ASF This document is licensed for use under a Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unsupported License May 2013 Strategic lessons Delivering science: Integration of multiple disciplines and approaches can help to understand complex problems. Developing capacity: Hands-on training in a strong research field team, such as we achieved in the cross-sectional study, builds adaptable and sustainable research skills. Influencing decisions: Building good relationships and networks, and early sharing of research findings with stakeholders, is important for impact from research. 30% of farm households in study area keep pigs. Sampled pig-keeping households own between 1 and 25 pigs, averaging 2.4 pigs. Livelihood strategies: • Breeding piglets for sale to other farmers, earning USD 10 (Uganda) or USD 13 (Kenya) av. per piglet • Rearing sub-adults for sale to butchers, earning USD 23 (Uganda) or USD 36 (Kenya) av. per animal after 5-7 months on farm • Boar service Average household income varies widely but income from pigs is consistently low, (average USD 40 pa +/- 16, n=683). This indicates that poorer households are most reliant on pigs for income. Women have stronger roles in pig keeping than in trade, especially in Uganda, but many households make pig trading decisions collaboratively. Pig keeping is dynamic. Seasonal food shortages (January to July) accelerate the rate of pig sales. Reducing ASF risk to smallholders Biosecurity is the only available strategy to reduce ASF risk and is virtually absent on every sampled farm. Some farmers say they could work together to adopt our recommended simple biosecurity practices, given advice and support. Managing ASF risk also needs: • incentives for farmers to report suspected ASF outbreaks rather than sell their pigs. • better capability for rapid confirmation of ASF diagnosis and rapid quarantine response Stronger market chains and more accessible feed sources are also important to encourage farmers to invest more in pig production and realise its potential for enhancing food security. Causal factors Prevalence of ASF virus in healthy pigs is negligible in the study area, based on molecular and serological tests of blood samples, indicating that study area outbreaks are caused by repeated reintroduction of ASF virus. Tissue sampling and testing (in progress) may show if the virus is sequestrated in tissues other than blood. Preliminary serological evidence suggests that Ornithodoros ticks may be a factor in transmission (37% of pigs tested positive for the tick exposure, n=232, Kenya only). Until these cryptic ticks are caught and tested it will not be clear if they are actually carrying ASF virus. Sales during outbreaks can readily spread infection to other pigs through direct contact. Farmers in 16 sampled villages reported they had sold pigs during ASF outbreaks. Seven farmers had pigs on their farm that they said showed signs of ASF infection at the time of sale. Containing outbreaks through quarantine is slow, hindered by slow confirmation of diagnosis. We have confirmed ASF virus presence/absence in <2 hours by running real time PCR in a pen side approach on- farm. But capability and cost constraints need to be overcome for application of the rapid diagnosis and quarantine. • 90% of farmer interviewees had heard of ASF • 8.2% said they had ASF on their farm in 2012 • 17% of pigs owned by surveyed households in the 12 months prior to interview (n=644) died before sale or other disposal. For >50% of these pigs, interviewees described clinical signs that indicate ASF. •Three confirmed outbreaks occurred in the study region July 2012-March 2013.
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