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Antimicrobial use and antimicrobial
resistance in broiler farms in peri-urban
Wakiso, Uganda
Introduction
• Antimicrobials are widely used in
poultry production
• Use is influenced by many factors
Study objectives
1. Describe antimicrobial use (AMU)
on semi-intensive, broiler farm in
peri urban Wakiso, Uganda.
2. Detect Salmonella spp. and quantify
antimicrobial resistant E. coli.
Methodology
• Cross-sectional study on 198 farms
randomly selected between October
– November 2021 (6 weeks).
• Farm size = 500-2000 broiler birds
• Structured questionnaire was used
to capture AMU data. Regression
analysis was performed using
Stata/SE 17.0
• For microbiology, two samples were
collected from one chicken coop per
farm: a boot sock and a composite
environmental.
• Traditional methods were used to
isolate and identify Salmonella spp.
• Quantification of AMR E.coli was
done by serial dilution and plating on
MacConkey agar with and without
antibiotic (namely cefotaxime and
colistin).
Presenting Author: Irene Mbatidde, PhD fellow,
i.mbatiddde@cgiar.org
This research is funded by BMZ, through BUILD
Uganda project
Conclusions
• AMU is frequent and imprudent
• Few farms positive for Salmonella
• >40% of farms have colistinR and
cefotaximeR but do not report the
direct use of these antibiotics
• Training, biosecurity and access to
veterinary services can promote
rational AMU.
Microbiology analysis
Irene Mbatidde1, Dickson Ndoboli1, Dreck Ayebare1, Savino Biryomumaisho2,
Kristina Roesel1, Michel Dione1, Dishon Muloi1, Bernd-Alois Tenhagen3,
Eddie Wampande2, John Elmerdahl Olsen4 and Arshnee Moodley1
Antimicrobial use observations
• Tetracycline was the most reported antibiotic class used (78% of farms).
• Purpose of AMU
• 73.38% for treatment, 42.86% for prophylaxis and 7.79% for
growth promotion.
• Poor biosecurity e.g. lack of footbaths at farm entrances
• Farmers reported vaccination challenges i.e. access to vaccines and
concerns on efficacy
• Little to no diagnostic testing to determine pathogen and susceptibility
profiles.
Factors influencing AMU
• Logistic regression showed a significant relationship between
• Easy access to vet services and AMU (Z=6.65 P=0.00).
• Having disease prevention training and AMU (Z=2.77, p= 0.01).
• Practising proper biosecurity and AMU (Z=10.4, p=0.000)
Results
E. coli on Brillance chromogenic agar and Salmonella on XLD
1International Livestock Research Institute, Kenya/Uganda, 2Makerere University, Uganda, 3Federal Institute
for Risk Assessment, Gemany,
4
University of Copenhagen, Denmark
N farms positive
(frequency in [%])
Salmonella spp. 17 (8.5)
E. coli 153 (77.3)
ColistinR E.coli 90 (45.5)
CefotaximeR E.coli 102 (51.7)
CFU counts:
• colistinR E.coli = 1 x 102 – 4.6 x 105
cfu/g
• Cefotaxime E.coli 1 x 102 – 1.1 x
106 cfu/g
Examples of chicken houses

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Antimicrobial use and antimicrobial resistance in broiler farms in peri-urban Wakiso, Uganda

  • 1. Antimicrobial use and antimicrobial resistance in broiler farms in peri-urban Wakiso, Uganda Introduction • Antimicrobials are widely used in poultry production • Use is influenced by many factors Study objectives 1. Describe antimicrobial use (AMU) on semi-intensive, broiler farm in peri urban Wakiso, Uganda. 2. Detect Salmonella spp. and quantify antimicrobial resistant E. coli. Methodology • Cross-sectional study on 198 farms randomly selected between October – November 2021 (6 weeks). • Farm size = 500-2000 broiler birds • Structured questionnaire was used to capture AMU data. Regression analysis was performed using Stata/SE 17.0 • For microbiology, two samples were collected from one chicken coop per farm: a boot sock and a composite environmental. • Traditional methods were used to isolate and identify Salmonella spp. • Quantification of AMR E.coli was done by serial dilution and plating on MacConkey agar with and without antibiotic (namely cefotaxime and colistin). Presenting Author: Irene Mbatidde, PhD fellow, i.mbatiddde@cgiar.org This research is funded by BMZ, through BUILD Uganda project Conclusions • AMU is frequent and imprudent • Few farms positive for Salmonella • >40% of farms have colistinR and cefotaximeR but do not report the direct use of these antibiotics • Training, biosecurity and access to veterinary services can promote rational AMU. Microbiology analysis Irene Mbatidde1, Dickson Ndoboli1, Dreck Ayebare1, Savino Biryomumaisho2, Kristina Roesel1, Michel Dione1, Dishon Muloi1, Bernd-Alois Tenhagen3, Eddie Wampande2, John Elmerdahl Olsen4 and Arshnee Moodley1 Antimicrobial use observations • Tetracycline was the most reported antibiotic class used (78% of farms). • Purpose of AMU • 73.38% for treatment, 42.86% for prophylaxis and 7.79% for growth promotion. • Poor biosecurity e.g. lack of footbaths at farm entrances • Farmers reported vaccination challenges i.e. access to vaccines and concerns on efficacy • Little to no diagnostic testing to determine pathogen and susceptibility profiles. Factors influencing AMU • Logistic regression showed a significant relationship between • Easy access to vet services and AMU (Z=6.65 P=0.00). • Having disease prevention training and AMU (Z=2.77, p= 0.01). • Practising proper biosecurity and AMU (Z=10.4, p=0.000) Results E. coli on Brillance chromogenic agar and Salmonella on XLD 1International Livestock Research Institute, Kenya/Uganda, 2Makerere University, Uganda, 3Federal Institute for Risk Assessment, Gemany, 4 University of Copenhagen, Denmark N farms positive (frequency in [%]) Salmonella spp. 17 (8.5) E. coli 153 (77.3) ColistinR E.coli 90 (45.5) CefotaximeR E.coli 102 (51.7) CFU counts: • colistinR E.coli = 1 x 102 – 4.6 x 105 cfu/g • Cefotaxime E.coli 1 x 102 – 1.1 x 106 cfu/g Examples of chicken houses