Virtual_Herbaria_TDWG_20111018_hrainer

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Virtual_Herbaria_TDWG_20111018_hrainer

  1. 2. <ul><li>General Thoughts </li></ul><ul><ul><li>Composition / Structure / Size of a Herbarium Collection </li></ul></ul><ul><ul><ul><li>Activities of internal staff (few K pa) </li></ul></ul></ul><ul><ul><ul><ul><li>purpose driven activities (specific coll.) </li></ul></ul></ul></ul><ul><ul><ul><ul><li>random (general coll.) </li></ul></ul></ul></ul><ul><ul><ul><li>Acquisition of material from external sources </li></ul></ul></ul><ul><ul><ul><ul><li>personal herbaria (few K to 1 M) exchange of material (few K) </li></ul></ul></ul></ul><ul><ul><ul><li>Acquisition of abandoned institutions (few 10K) </li></ul></ul></ul><ul><ul><ul><li>Merging of institutions / collections ( parallel worlds ) </li></ul></ul></ul>Virtual Herbaria ---> JACQ TDWG - New Orleans / 2011-12-03
  2. 3. <ul><li>General Thoughts </li></ul><ul><ul><li>Purpose and Value of a Herbarium Collection </li></ul></ul><ul><ul><ul><li>Voucher material for scientific projects </li></ul></ul></ul><ul><ul><ul><li>Basis for Floristic and Taxonomic work </li></ul></ul></ul><ul><ul><ul><li>Historical evidence </li></ul></ul></ul><ul><ul><ul><li>Nomenclatural acts </li></ul></ul></ul>TDWG - New Orleans / 2011-12-03
  3. 4. <ul><li>General Thoughts </li></ul><ul><ul><li>Collaborative / Integrative / Open approach </li></ul></ul><ul><ul><ul><li>once record is entered in common system reusable for others </li></ul></ul></ul><ul><ul><ul><li>Lookup tables (webservices) for </li></ul></ul></ul><ul><ul><ul><ul><li>Person Names, incl. min. biographic data </li></ul></ul></ul></ul><ul><ul><ul><ul><li>Geographic Names </li></ul></ul></ul></ul><ul><ul><ul><ul><li>Scientific Names, incl. Common Name representations </li></ul></ul></ul></ul><ul><ul><ul><li>Classification Systems (webservices ?) </li></ul></ul></ul><ul><ul><ul><li>Direct output of data via standard routes (csv, kml, ABCD) </li></ul></ul></ul>TDWG - New Orleans / 2011-12-03
  4. 5. <ul><li>databasing issues </li></ul><ul><ul><li>Legibility and perceivability of the label text </li></ul></ul><ul><ul><ul><li>handwriting often using gothic letters; latin text </li></ul></ul></ul><ul><ul><ul><li>historical placenames and political entities </li></ul></ul></ul><ul><ul><ul><li>missing information </li></ul></ul></ul><ul><ul><li>Taxonomy / Synonymy </li></ul></ul><ul><ul><ul><li>old vs. current(ly used) names </li></ul></ul></ul><ul><ul><ul><li>differing taxonomies </li></ul></ul></ul><ul><ul><li>Geographic Reference Systems </li></ul></ul><ul><ul><ul><li>UTM / Lat/Long coordinates / raster grids </li></ul></ul></ul>TDWG - New Orleans / 2011-12-03
  5. 6. Digitizing the Vienna Herbaria Pisa / 2007-09-12
  6. 9. <ul><li>Prerequisites </li></ul><ul><ul><ul><li>webbased front end – platform „independent“– no separate client software installation </li></ul></ul></ul><ul><ul><ul><li>unicode </li></ul></ul></ul><ul><ul><ul><li>nomenclature – multiple taxonomies </li></ul></ul></ul><ul><ul><ul><li>GIS output capabilities </li></ul></ul></ul>TDWG - New Orleans / 2011-12-03
  7. 10. <ul><ul><li>Back End </li></ul></ul><ul><ul><ul><li>MySQL 5.1 </li></ul></ul></ul><ul><ul><ul><li>input server + replicated output server(s) </li></ul></ul></ul><ul><ul><ul><li>image servers / SAN solution 20TB </li></ul></ul></ul><ul><ul><li>Front End </li></ul></ul><ul><ul><ul><li>php / javascript / xajax / jquery </li></ul></ul></ul><ul><ul><li>Input / Output / Imageserver / Access Fuzzy Matching Services (Taxamatch) </li></ul></ul>TDWG - New Orleans / 2011-12-03
  8. 11. TDWG - New Orleans / 2011-10-18
  9. 12. TDWG - New Orleans / 2011-10-18
  10. 13. TDWG - New Orleans / 2011-12-03 Multimaster Architecture
  11. 14. specimen simplified data model monographs revisions floras article-level protologues reference outside local db (IPNI, IF, PL; HUH; geonames, BHL) (G)UID TDWG - New Orleans / 2011-12-03 names taxonomic backbone geographic reference actor / person / team institution / collection type det.
  12. 17. Managing the Vienna Herbaria
  13. 21. TDWG - New Orleans / 2011-12-03
  14. 22. <ul><li>Consortium 2011-10 </li></ul><ul><ul><li>GJO – Joanneum, AT ~ 600 K / 6% - T ~ 5.000 – 0% </li></ul></ul><ul><ul><li>GZU – Karl Franzens University of Graz, AT ~ 800 K / 8% - T ~ 8.000 / 73% HAL – Martin Luther Universität Halle-Wittenberg, GE ~ 500 K / 1% - T ~ 10.000 / 52% JE – Friedrich Schiller Universität Jena – Herbarium Haussknecht, GE ~ 3 M / 0,7% - T ~ 30.000 / 70% KUFS – Kabul University, AF ~ 23k / 97% - T ~ ? MJG – Johannes Gutenberg University Mainz, GE ~ 40 k / 6% - T ~ 500 / 0,2% </li></ul></ul><ul><ul><li>MNHM – Natural History Mainz, GE ~ 48 k / 2% - T ~ 500 / 0% </li></ul></ul><ul><ul><li>TGU – University of Montenegro, ME ~ 15 k / 2% - T ~ 50 / 0% </li></ul></ul><ul><ul><li>W – Natural History Museum Vienna, AT ~ 5.5 Mio / 1,4% - T ~ 200.000 / 11,2% </li></ul></ul><ul><ul><li>WU – University of Vienna, AT ~ 1.5 Mio / 4% - T ~ 75.000 / 9,9 % </li></ul></ul>TDWG - New Orleans / 2011-12-03
  15. 23. Kurt Zernig (GJO); Anton Drescher, Helmut Mayrhofer, Walter Obermayer, Christian Scheuer (GZU); Wolfgang Neuner, Gerhard Tarmann (IBF), Michael Malicky (LI); Toni Igersheim, Robert Sailer, Ernst Vitek, Bruno Wallnöfer (W); Fritz Ehrendorfer, Walter Gutermann, Tod Stuessy, Walter Till (WU); Walter Behrendsohn, Markus Döring, Werner Greuter (B); Jarlie Jarvis (BM); José Murillo (COL); Philip Silverstone-Sopkin (CUVC); Juri Roskov (LE/RNG); Uwe Braun, Martin Röser (HAL); Richard Saunders (HKU); Hermann Manitz, Jochen Müller (JE); Gill Challen, John Dransfield, Sally Hinchcliffe (K); Paul Keßler (L); Stephan Beck (LPB); Wilfried Morawetz (LZ); Doug Daly, Andrew Henderson, Jacky Kallunki, Scott Mori, Michael Nee, Wayt Thomas, Tom Zanoni (NY); Tom Croat; George Schatz (MO); David Johnson (OWU); Thierry Deroin, Annick LeThomas, Odile Poncy (P); Tiangang Gao (PE); Frank Bisby (RNG); Renato Mello-Silva, José Rubens Pirani (SPB); Gerhard Gottsberger (ULM); Paul & Hiltje Maas, Lubbert Westra, Gea Zijlstra (U); Lars Chatrou (WAG); Otto Huber (VEN) Gerhard Glatzel (ÖAW); Martin Götzl, Herbert Schenz, Kathi Schleidt (UBA); Paul Schreilechner (BioGIS), Wolfgang Koller, Barbar Pratschner, Johannes Schachner FWF, ÖAW, Andrew W. Mellon Foundation, GBIF, Species2000

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