[DCTPE2010] Biodiversity & Drupal

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[DCTPE2010] Biodiversity & Drupal

  1. 1. Biodiversity & Drupal burkeker@gate.sinica.edu.tw July 10th, 2010
  2. 2. image: http://web1.nsc.gov.tw/ct.aspx?xItem=7991&ctNode=40&mp=1
  3. 3. • ... • • • • • (DNA) • ... • cc by-nd Nick Kurzenko, Greg Rouse, and the U. S. Fish and Wildlife Service
  4. 4. • (NHM) • • • Lepidoptera British Fleas Chalcid Wasps Martian Meteorites • • • • • • Spanish Sandflies Solanaceae • Loch Ness Worms Bumble bees a slide from V.Smith
  5. 5. Joomla WordPress Plone Drupal a slide from V.Smith
  6. 6. http://www.idealware.org/comparing_os_cms/ a slide from V.Smith
  7. 7. http://scratchpads.eu a multisite implementation of Drupal a slide from V.Smith
  8. 8. a slide from V.Smith
  9. 9. BiotaTaiwanica - a pilot Drupal project • • LifeDesks ScratchPads • http://psybugs.biota.biodiv.tw
  10. 10. specimens node image collecting events node tags citation latin names keywords image metadata node collecting event vernaculars categories specimen literatures node description diagnostic descriptions node
  11. 11.
  12. 12. Content Types (system components) Workflows Products Taxonomic Information (Name data) Taxonomic Validation Service / Darwin Core Checklist Archive Backbone File Archiving Service (DwC-A) IUCN red list ISSG invasive species attributes CBD indicators Species Profiling Species Profiles (TDWG) Service Plazi TaxonX Species description Multimedia / digital objects - derived Data Store Modeling Results LIterature Modeling/Statistical Service e.g. diagrams, numerical matrics query Connections to R Species occurrence: polygons Species occurrence: points producer Environmental spatial features Mapping Service WMS, WFS - Habitats GIS-Ready - Ecosystems Data Store - Climate Metadata Packaging CASSIA, EML, FGDC-BDP, - Geographic Service ISO-19115 or other metadata Other types of spatial data formats Metadata Metadata Other service workflows Other results Annotation layers Catalogue
  13. 13. LifeDesks Classification modules (EOL) Taxonomy module (Drupal core) - utilize Drupal taxonomy - defines vocabulary - provide editable name flags - classification is one vocabulary - easy drag & drop edit interface - allows multiple tagging - export in Darwin Core & other formats - ability to relate between terms Modules for attributing name entries - maybe one more biological flag needed LifeDesks Taxon Page modules (EOL) - create content type: Taxon Page - map to Species Profile Model - customizable headers and chapters - connect to EOL as a content partner Content Types (system components) Workflows Products Taxonomic Information (Name data) Taxonomic Validation Service / Darwin Core Checklist Archive Backbone File Archiving Service (DwC-A) Image module (community) and others designed to handle IUCN red list various media types ISSG invasive species attributes CBD indicators Species Profiling Species Profiles (TDWG) Service Plazi TaxonX Species description Multimedia / digital objects - derived Data Store Modeling Results Modules for connecting to Biblio module (community) LIterature Modeling/Statistical Service e.g. diagrams, numerical matrics statistical solutions - provides forms for managing citations Connections to R - BibTex import/export Species occurrence: polygons query - redirect to Google Scholar Species occurrence: points producer Environmental spatial features Mapping Service WMS, WFS WFS module - Habitats GIS-Ready - export geodata as WFS - Ecosystems Data Store - Climate Metadata Packaging CASSIA, EML, FGDC-BDP, Darwin Core module (ScratchPads) - Geographic Service ISO-19115 or other metadata - combined with Location module and Gmap module Other types of spatial data formats - handle specimen and observation data Metadata Metadata Other service workflows Other results Annotation layers Catalogue Location module - manage locality and coordinate CCK + Views - create content type - include custom fields - provide forms for entering data Gmap module - publish as XML using Views modules - provide Google Map layer Nice Map module - provide Google Map layer Profile Modules for handling geospatial data - settings of a functioning site - may need to combine with other geospatical solutions - used of quickly setup of a new site
  14. 14. Biodiversity is life Biodiversity is our life
  15. 15. Drupal 20

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