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Intracellular highways in the plants: the role of the cytoskeleton in camv infections

  1. Intracellular highways in the plants: the role of the cytoskeleton in CaMV infections. James Schoelz
  2. 42 Division of Plant Sciences Faculty 101 Graduate Students 34 MS 67 PhD
  3. Five Program Areas Crop, Soil and Pest Management Entomology Horticulture Plant Stress Biology Plant Breeding, Genetics and Genomics
  4. Plant Sciences Biological Sciences Biochemistry Computer Science Forestry Chemistry USDA-ARS Plant Genetics Unit The IPG --- who we are… • Established in 1981 to develop a program of excellence in plant science • 58 faculty teams; recognized for interactive and cooperative research and education community • 2 National Academy of Science members • 18 Fellows of the American Association for the Advancement of Science (AAAS) In 2010, MU was ranked 14th in the world among universities for plant science research (Times Higher Education)
  5. Building on a strong history in plant genetics
  6. INTERDISCIPLINARY PLANT GROUP U N I V E R S I T Y O F M I S S O U R I ARABIDOPSIS C O L U M B I A W I L D T Y P E PROF. GEORGE RÉDEI (1921-2008)
  7. Older view of Inclusion Bodies: P6 inclusion bodies are garbage dumps; they form after the protein has finished its specific task. CaMV P6 Protein
  8. Older view of Inclusion Bodies: P6 inclusion bodies are garbage dumps; they form after the protein has finished its specific task. New Interpretation: In the space of a few days, the P6 protein is able to assemble into a “virion factory”. Cells initially contain many, small P6 inclusion bodies that utilize the cell’s cytoskeleton to move throughout the interior of the cell. They will eventually coalesce into a single inclusion the size of a chloroplast. Central hypothesis – P6 inclusion bodies function to deliver virions to the plasmodemata for transport to adjacent cells CaMV P6 Protein
  9. What Every Plant Virus Must Do to Survive R (-)3' (+)5' 5' (+) cp cp cp cp cp (+ )5' (-) (+ )5' R R R R R R RR 5' (+) Replicate Progeny Genomes Move to Other Plants Uncoat the Viral Genome Express Proteins needed for genome Replication. Enter the Cell Produce proteins needed for Virion formation and Cell to cell Movement Move through the plant Assemble Virions
  10. Cauliflower Mosaic virus Source of the the 35S promoter First plant virus genome to be sequenced – 1981 First plant virus to be cloned in infectious form – 1981 First viral avirulence gene i.e. a pathogen gene that triggers a plant defense response) to be characterized by recombinant DNA techniques – P6 - 1984
  11. Genome Structure of Cauliflower Mosaic virus Gene I - cell-to-cell movement Gene II - aphid transmission Gene III - DNA binding; aphid transmission Gene IV - coat protein V - reverse transcriptase VI - Translational transactivator/Forms inclusion bodies. CaMV 8.0 kb (Modified from Haas et al., 2002)
  12. Turnip leaf epidermal strip stained with phloxine B illustrates CaMV inclusions Electron micrograph of a turnip leaf cell infected with CaMV
  13. Viruses have developed Movement Proteins (MPs) to facilitate transport through plasmodesmata Class I Class IIVirions Major Movement Classes : MP:RNA complexes & Virions
  14. Tubules mediate cell-to-cell movement of virions of some viruses Tubule-like structures (aprox. 35 nm dia) containing a single row of virions are present in plants infected by CPMV. See Pouwels et al., Mol Plant Path. 3:411 (2002).
  15. Tubules Mediate Cell-to-cell Movement of Virions Tubule-like structures (aprox. 35 nm dia) containing a single row of virions are present in plants infected by CPMV. Movement proteins are responsible for tubule formation See Pouwels et al., Mol Plant Path. 3:411 (2002).
  16. Tubules Mediate Cell-to-cell Movement of Virions Tubule-like structures (aprox. 35 nm dia) containing a single row of virions are present in plants infected by CPMV. Movement proteins are responsible for tubule formation Tubules containing virions have also been observed for: Nepoviruses Tospoviruses Caulimoviruses See Pouwels et al., Mol Plant Path. 3:411 (2002).
  17. Where are CaMV P6 inclusion bodies found within the cell?
  18. The Agroinfiltration Technique 1. Grow Agrobacterium tumefaciens carrying the desired binary vector in 1.0 ml of broth overnight at 28 C in a shaker/incubator. 2. Add acetosyringone, a signal produced by wounded plants that mobilizes the transfer of the T-DNA of the binary vector into plant cells. Incubate overnight. 3. Fill a 5.0 ml syringe with Agrobacterium cells, apply the syringe to the surface of a leaf, and gently infiltrate the solution into plant tissue.
  19. Agroinfiltration of Gene VI of from different CaMV strains W260 Gene VI D4 Gene VI pW260VI rbcs35S rbcs35SpD4VI
  20. P6 inclusions are associated with actin microfilaments, as well as ER and microtubules. P6-GFP dsRed2-talin (labels thick actin cables) Co-agroinfiltrationof P6-GFP and dsRed2-talin into N. benthamiana and visualization of P6/actin association. Harries et al. (2009) The Cauliflower mosaic virus protein P6 forms motile inclusions that traffic along actin microfilaments and stabilize microtubules. Plant Physiology 149, 1005-1016. Phil Harries
  21. P6 inclusion bodies can traffic along actin filaments. Harries P et al. Plantphysiol 2009;149:1005-1016 ©2009 by American Society of Plant Biologists
  22. CaMV P6 inclusion bodies move on microfilaments
  23. The actin inhibitor LatB inhibits CaMV infection.
  24. Virions are assembled in the P6 inclusion bodies and most of the CaMV virions remain in the inclusion bodies. P6 Inclusion Bodies as “Virion Factories” Consequently, for CaMV virions to move from cell-to-cell there must be some mechanism for transfer of virions from the P6 inclusion body, the site for viral synthesis and virion assembly, to the plasmodesmata.
  25. Nucleus Model for P6 motility function during CaMV infection 35S RNA P6 protein Microtubule Microfilament Virion CaMV/P6 Inclusion
  26. What host proteins interact with the P6 protein of CaMV? What host proteins might potentially facilitate intracellular movement to plasmodesmata?
  27. Previous yeast two-hybrid screens focused on the role of P6 in translational transactivation and silencing suppression Eukaryotic translation factor 3 subunit g (eIF3g)(Park et al. 2001) Ribosomal subunits L13, L18, and L24 (Leh et al., 2000) RNA silencing protein DRB4 (Haas et al. 2008)
  28. Interactions of P6 with virus and host proteins – Results of a Y2H Screen Eighteen proteins identified in a total of 85 clones Ribosomal initiation factor eIF3 ( represented in 17 independent clones) Cytoskeleton-related CHUP1 – interacts with actin for movement of chloroplasts on microfilaments (represented in one clone) Membrane Associations AtSRC2.2 – C2 calcium-dependent membrane targeting protein kinase C (represented in 17 independent clones)
  29. CHUP1 is responsible for chloroplast movement within the cell in response to light intensity Accumulation Avoidance Low Light High Light Redrawn from Wada (2013). Chloroplast movement. Plant Science 210, 177-182
  30. Col-0 T-DNA line 129128C White Band Assay Analysis of Arabidopsis thaliana CHUP1 T- DNA knockouts
  31. Localization of CHUP1-CFP to the outer membrane of chloroplasts in N. benthamiana leaves CHUP1-eCFP Chloroplasts Merged 10 µm Carlos Angel Angel et al. 2013. The P6 protein of Cauliflower mosaic virus interacts with CHUP1, a plant protein which moves chloroplasts on actin microfilaments. Virology 443, 363-374.
  32. Co-localization of CHUP1 with P6-Venus(YFP) 10 µm MergedChloroplasts CHUP1-eCFP P6-Venus(YFP)
  33. Sample CHUP1-GFP P6-GFP P6-RFP + - - - + - - - + + - + - + + 72kDa 95kDa 72kDa 95kDa Total Blot: αGFP Total Blot: αRFP 72kDa 95kDa Co-IP: αGFP Blot: αRFP 1 2 3 4 5 Sample CHUP1-GFP P6-GFP P6-RFP + - - - + - - - + + - + - + + 1 2 3 4 5 Co-Immunoprecipitation of P6-RFP with the truncated CHUP1-GFP Co-Immunopreciptation of P6-RFP with P6-GFP
  34. Dominant Negative inhibition of chloroplast movement Expression of a truncated CHUP1 protein consisting of the first 500 amino acids, abolished the movement of chloroplasts in Arabidopsis plants, acting as a dominant negative inhibitor (Oikawa et al., 2008). Question: Since our CHUP1-CFP construct consists of the 436 first amino acids, can we block the movement of P6 – Venus YFP inclusion bodies?
  35. Time lapse imaging of P6- Venus YFP inclusion bodies
  36. Time lapse imaging of AtCHUP-eCFP and P6- Venus YFP inclusion bodies (Angel et al., 2012, submitted)
  37. Question What effect does the loss of CHUP1 have on CaMV infections?
  38. Experimental Design for Chup1 VIGS in N. edwardsonii and inoculation of CaMV virions CaMV virions inoculation21 days 5-6 week old plants CaMV HR local lesions development The Hypersensitive Response (HR – programmed cell death) in N. edwardsonii. Necrotic local lesions induced by CaMV strain W260 in inoculated leaves. This virus is unable to move systemically because N. edwardsonii mounts an effective defense. Question: Will lesion number or size be affected in N. edwardsonii CHUP1 silenced plants?
  39. Percentage of necrotic lesion development in N. edwardsonii : lesions develop at a slower rate in CHUP1- silenced plants than in controls (ANOVA, p=0.01).
  40. The Association of CHUP1 with CaMV P6 Confirmed with Y2H, co-IP and co- localization in vivo Silencing of CHUP1 in N. benthamiana significantly slows the rate of CaMV lesion development. Transient expression of a truncated CHUP1 blocks the movement of chloroplasts (Oikawa et al. 2003) and P6 inclusion bodies (Angel et al. 2013).
  41. Nucleus P6 protein Microtubule Microfilament Virion CaMV/P6 Inclusion CHUP1 – May explain the interaction of P6 inclusion bodies with microfilaments, and participates in movement of P6 inclusion bodies on microfilaments. CHUP1 Angel et al. 2013. The P6 protein of Cauliflower mosaic virus interacts with CHUP1, a plant protein which moves chloroplasts on actin microfilaments. Virology 443, 363-374.
  42. Question Are CaMV P6 inclusion bodies associated with plasmodesmata? Andres Rodriguez
  43. Interactions of P6 with virus and host proteins – Results of a Y2H Screen Eighteen proteins identified in a total of 85 clones Ribosomal initiation factor eIF3 ( represented in 17 independent clones) Cytoskeleton-related proteins CHUP1 – interacts with actin for movement of chloroplasts on microfilaments (represented in one clone) Membrane Associations AtSRC2.2 – C2 calcium-dependent membrane targeting protein kinase C (represented in 17 independent clones) SRC2.2 = Soybean Response to Cold
  44. Three experimental techniques indicate an association of AtSRC2.2 with CaMV P6 Y2H Co-IP Co-localization in vivo Where is AtSRC2.2 found in the cell?
  45. AtSCR2.2-RFP PDLP1-GFP Cell wall Plasma membrane Overlay Plasmolyzed cell A portion of AtSRC2.2- RFP co-localizes with the plasmodesmal protein PDLP1 Co-agroinfiltration of PDLP1-GFP with AtSCR2.2-RFP into N. benthamiana leaves
  46. AtSCR2.2-RFPP1-GFP Overlay A portion of AtSRC2.2- RFP co-localizes with CaMV P1-GFP CaMV P1 (the CaMV movement protein) is localized to plasmodesmata Co-agroinfiltration of P1-GFP with AtSRC2.2-RFP into N. benthamiana leaves
  47. P1-GFP P1-GFP + untagged P1 Formation of tubules is likely carried out by untagged P1. P1-GFP allows for the visualization of the tubules.
  48. Conti G.G., Vegetti G., Bassi M., Favali M.A. 1972. Some Ultrastructural and Cytochemical Observations on Chinese Cabbage Leaves Infected with Cauliflower Mosaic Virus. Virology 47, 697-700.
  49. Longitudinal view Transversal view Conti G.G., Vegetti G., Bassi M., Favali M.A. 1972. Some Ultrastructural and Cytochemical Observations on Chinese Cabbage Leaves Infected with Cauliflower Mosaic Virus. Virology 47, 697-700.
  50. AtSRC2.2 was co-localized with 43.1% of P1 tubules, with C2CDMT found at the base (80%) or within the tubule (20%). AtSRC2.2-RFP MergedP1-GFP + Untagged P1
  51. Question Are P6 inclusion bodies associated with plasmodesmata?
  52. PDLP1-GFP P6-RFP MERGED Some P6 inclusion bodies are found adjacent to plasmodesmal markers Co-agroinfiltration of P6-RFP with PDLP1-GFP into N. benthamiana leaves
  53. PDLP1-GFP P6-RFP MERGED
  54. Aniline Blue P6-RFP MERGED Thomas et al, 2008. Use of Aniline Blue as plasmodesmal marker Some P6 inclusion bodies are found adjacent to plasmodesmal markers
  55. P6 P1AtSRC2.2 Y2H Co-localization in vivo Co-IP Co-localization in vivo Y2H (Hapiak et al, 2008) Co-localization in vivo
  56. Nucleus P6 protein Microtubule Microfilament Virion CaMV/P6 Inclusion CaMV P6 is capable of forming a complex with CaMV P1 protein, AtSRC2.2, PDLP1 at plasmodesmata CaMV MP (P1) AtSRC2.2 PDLP1 Plasmodesma modified into tubule by CaMV P1 Protein
  57. A new function for CaMV P6: delivery of virions to plasmodesmata P6 inclusion bodies are considered the site for virion assembly and accumulation P6 inclusion bodies associate with and move on microfilaments P6 inclusion body movement on microfilaments may be facilitated through an interaction with CHUP1 and one or more myosins At least a portion of P6 inclusion bodies are associated with plasmodesmata P6 appears to be capable to form a complex at the plasmodesmata with CaMV P1 (the cell-to-cell movement protein), AtSRC2.2, and PDLP1.
  58. Exactly what is the function of the CaMV P6 protein? 1. Is the matrix protein for the vacuolated, amorphous inclusion bodies: forms “virion factories” 2. Avirulence gene product and symptom determinant 3. Translational transactivator: facilitates the translation of viral genes on the polycistronic 35S RNA 4. A shuttle protein, moving between the cytoplasm and nucleus 5. A silencing suppressor 6. Regulates SA-mediated defenses and cell death pathways 7. Delivery of virions to plasmodesmata
  59. Exactly what is the function of the CaMV P6 protein? The “function” of P6 may be its capacity to interact with a broad range of host proteins. The capacity to form indiscriminate associations with host proteins might be considered a survival mechanism to take advantage of whatever a host has to offer. In this hypothesis, the composition of host proteins in the P6 inclusion bodies might be dynamic, constantly changing as the infection within the cell matures. In
  60. Acknowledgments Schoelz Lab (current and former members) Nelson Lab (current and former members) Dr. Carlos Angel Dr. Philip Harries Dr. Boovaraghan Balaji Dr. Xiaohua Yang Dr. Andres Rodriguez Dr. Xin S. Ding Yu Zhang Dr. Malay Saha Sandra Valdes Bethany Bishop Mohammad Fereidouni Mustafa Adhab Adam Adair Dr. Scott M. Leisner and Lindy Lutz. (The University of Toledo, Toledo OH). Dr. Michael Goodin and Kathleen Martin. (University of Kentucky, Lexington KY) Dr. Aleksandr Jurkevic. (MU Molecular Cytology and Microscopy Core) Dr. Howard Berg. (Cytology Core, The Donald W. Danforth Center, St. Louis MO).
  61. Genome structures of plant viruses are deceptively simple Gene I - cell-to-cell movement Gene II - aphid transmission Gene III - DNA binding; aphid transmission Gene IV - coat protein V - reverse transcriptase VI – Translational transactivator/Forms inclusion bodies. CaMV 8.0 kb (Modified from Haas et al., 2002)
  62. D1 D4D3D2 Host Range, Symptoms & P6 Self Association Mini TAV RNA Binding Zinc Finger P6 Self Association Chloroplast Interaction Leucine zipper Proline-rich, interacts with Profilin/Actin Leucine zipper Coiled-coil Actin binding CaMV P6 binding 1004 aa CHUP1 structure P6 structure CHUP1 binding What domains are responsible for the interaction of CHUP1 and CaMV P6?
  63. (Modified from Wada and Suetsugu 2004) P6 Is there any relationship between CaMV P6 and chloroplast movement?
  64. P6-interacting region 10 218 360 aa C2 Domain 6 112 189 Pro-Rich region 320 Cho & Stahelin, 2006 C2 domain is the second most abundant lipid binding domain. C2-domain-calcium dependent proteins are involved in signal transduction and membrane trafficking.
  65. P6-GFP C2CDMT-RFP Overlay
  66. P6-GFP - - + + Initial Extract Blot: αRFP Co-IP: αGFP Blot: αRFP Co-IP: αGFP Blot: αGFP C2CDMT-RFP - + - + Initial Extract Blot: αGFP 70KDa 90KDa 70 kDa 90 kDa 1 2 3 4 Sample B A C D C2CDMT-RFP is co-immunoprecipitated with P6-GFP
  67. Three experimental techniques indicate an association of C2CDMT with CaMV P6 Y2H Co-IP Co-localization in vivo Where is C2CDMT found in the cell?
  68. Question Do myosins contribute to intracellular movement of CaMV? Andres Rodriguez Carlos Angel Yu Zhang
  69. (Peremyslov et al., 2011) Arabidopsis Myosins implicated in plant virus movement through T-DNA knockouts or silencing
  70. Development of CaMV infections in an A. thaliana chup1 T- DNA knockout line versus wild type Col-0 Symptoms in the AtCHUP1 T-DNA knockout line were delayed, but CaMV systemic symptom development was not abolished. Days Post Inoculation (dpi) PercentageofPlantswithSystemic Symptoms 0 10 20 30 40 50 60 70 80 9 10 11 12 13 Col-0 CHUP1 0 10 20 30 40 50 60 70 80 90 100 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 Col-0 CHUP Days Post Inoculation (dpi) PercentageofPlantswithLocalLesions
  71. 0 10 20 30 40 50 60 70 80 90 100 7 8 9 10 11 12 13 Col-0 XI-2 0 20 40 60 80 100 120 10 11 12 13 14 15 16 17 18 Col XI-2 Development of CaMV infections in an A. thaliana myosin XI- 2 T-DNA knockout line versus wild type Col-0 PercentageofPlantswithLocalLesions Days Post Inoculation (dpi)Days Post Inoculation (dpi) PercentageofPlantswithSystemic Symptoms Primary lesion development in the myosin XI-2 T-DNA knockout line was consistently delayed by one day, but CaMV symptom development was not abolished.
  72. Development of CaMV infections in the A. thaliana XI-2/chup1 double T- DNA knockout line versus wild type Col-0 PercentageofPlantswithLocalLesions Days Post Inoculation (dpi)Days Post Inoculation (dpi) PercentageofPlantswithSystemic Symptoms Primary lesion development in the double T-DNA knockout line was consistently delayed by one day, and CaMV systemic symptom development was delayed by one to three days. 0 10 20 30 40 50 60 70 80 90 100 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 Col-0 CHUP/XI-2 0 10 20 30 40 50 60 70 80 90 100 1 2 3 4 5 6 7 8 9 10 11 Col-0 CHUP/XI-2
  73. PDLP1-GFP - - + + Initial Extract Blot: αRFP Co-IP: αGFP Blot: αRFP Co-IP: αGFP Blot: αGFP P6-RFP - + - + Initial Extract Blot: αGFP 60KDa 90KDa 90 kDa 60 kDa 1 2 3 4 Sample B A C D P6-RFP is co-immunoprecipitated with PDLP1-GFP Heavy chain IgG
  74. Development of CaMV infections in a Atsrc2.2 A. thaliana T-DNA knockout line and in the triple T-DNA knockout pdlp123 Two tests were completed to compare the susceptibility of a Atsrc2.2 T- DNA knockout line to wild type Col-0. There was no difference in the timing of local or systemic symptoms. By Contrast A delay in CaMV infections was observed in the triple T-DNA knockout pdlp123. However, even with the triple knockout line, CaMV infections were not abolished (Amari et al., 2010). Amari et al. 2010. A family of plasmodesmal proteins with receptor-like properties for plant viral movement proteins. PLoS Pathogens 6 (9) e1001119 1-10. 100 A
  75. Percentage of necrotic lesion development in N. edwardsonii : lesions develop at a slower rate in CHUP1- silenced plants than in controls (ANOVA, p=0.01).
  76. Development of Local Lesions by CaMV in N. edwardsonii and in CHUP1-Silenced Plants Number of HR lesions per leaf was not statistically different (ANOVA, p=0.05) LesionNumbersperLeaf
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