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The BIG picture - Advanced data visualization for SDG, basic stock assessment methods and environmental monitoring

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BlueBRIDGE workshop: "Supporting Blue Growth with innovative applications based on EU e-infrastructures" - Brussels February 2018

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The BIG picture - Advanced data visualization for SDG, basic stock assessment methods and environmental monitoring

  1. 1. BlueBRIDGE receives funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 675680 www.bluebridge-vres.eu The picture Advanced data visualization for SDG 14.4.1 monitoring, basic stock assessment methods, and environmental monitoring Anton Ellenbroek FAO of the UN Anton.Ellenbroek@fao.org Supporting Blue Growth with innovative applications based on EU e-infrastructures 14-15 February 2018, Brussels
  2. 2. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Fisheries Environmental Catalogs 15/02/2018 2
  3. 3. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Data Visualization summary One picture says more than a 1000 words, a 1000 pictures say more than 1 M LOC The data services share: Infrastructure based opportunities; Community driven development; Open source tools; Science-2 paradigm; Great results! 15/02/2018 3 WPS REST
  4. 4. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Fisheries data; Invasive species modeling 15/02/2018 4 Modeling of events requires many data sources BlueBRIDGE data services provide Access to biodiversity data Access to environmental data Computing resources Computing management Output capture Services can be mobilized quickly R-based code Data-mining facilities Provenance / Metadata driven Science-2 and FAIR Principles RRR of Experiments
  5. 5. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Fisheries data; Tuna AtlasWhere’s the catch? In this VRE In a SDI Based on FAIR principles: Findable, Accessible, Interoperable and Re-usable (and Transparency and Reproducibility) Catch data in a database That feeds a OGC catalog That feeds a webviewer Based on a complete SDI; easily replicable (unique!!) features 15/02/2018 5
  6. 6. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Fisheries data Status Monitoring A Rshiny app in a VRE To assist e.g. with monitoring SDG-14.4.1: Proportion of fish stocks within biologically sustainable levels; Focus on understanding and capacity development Use the infrastructure R, Rshiny and Docker approach Quick deployment of new features (days) 15/02/2018 6
  7. 7. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Fisheries data Global record of Stocks and Fisheries A CKAN based catalog of stocks and fisheries in a VRE To assign Unique Identifiers Across different data providers (FAO, RAM, SFP) For different purposes (SDG14.4.1, Traceability) Based on infrastructure services Matware for building the semantic knowledge base Marine TLO (cross-referencing ontology) CKAN catalog to publish the results 15/02/2018 7
  8. 8. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Environmental data Protected Areas Impact Maps Get your MPA reporting in “shapes” with a VRE To assist with monitoring of AICHI 11 User defined on-line and pdf reports Based on (again...) the SDI => reuse components Unique feature to upload YOUR MPA Shape 15/02/2018 8
  9. 9. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels 15/02/2018 9 Environmental data Aquaculture Atlas; Mediterranean Based on free optical imagery; a VRE to Detect cages Edit cages Merge algorithm for information Publish data to a geoserver For each farm, attributes are available Validation workflow User management Flexible attributes Maps available Greece (Months) Malta (Hours) Easy to reproduce
  10. 10. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Environmental data Aquaculture Atlas; Indonesia 15/02/2018 10 Based on Sentinel and Landsat imagery Infrastructure interoperability Loads images from EO data catalog Comparison between 1994-1997 and 2014-2017 Unique S1 and S2 and Landsat composite Quick scan of Land-use classification Output to a standard SDI (Geoserver) Accessible by GIS Software Available for WPS processes; e.g. to Merge with other layers Compute suitability
  11. 11. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Environmental data Products List and follow evolution of marine aquaculture features Obtain a preliminary regional assessment of coastal wetland use National and international organizations can
  12. 12. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Environmental data 15/02/2018 12 Generate uniform timeseries of predicted environmental values NOAA and NASA for climate indicators AquaMaps for other (environmental) A harmonized experimental data space Example: Sea surface temperature forecast
  13. 13. "Supporting Blue Growth with innovative applications based on EU e-infrastructures”, 14-15 February 2018, Brussels Catalogs Data, data everywhere but not a Byte to eat BlueBRIDGE key catalogs CKAN (e.g. GRSF, CWP); Geonetwork; part of the SDI THREDDS; for NetCDF geospatial data SDMX Registry; for statistical timeseries, DSDs BlueBRIDGE services access to e.g. EO (Copernicus) data catalogs and services EU marine data (Seadatanet in PAIM VRE) OAI-PMH BlueBRIDGE Bridges between these catalogs Data harmonization (In a domain; GRSF, PAIM, TA) Data Integration (Across domain; Modeling of species and CC) 15/02/2018 13

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