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http://www.biocatalogue.org ISMB, 01 July 2009 Franck Tanoh Jiten Bhagat University of Manchester, UK
<ul><li>Public, curated catalogue of Life Science Web Services </li></ul><ul><li>Register, find, curate Web Services </li>...
Who?
Web Services? <ul><li>A component that you send some inputs to </li></ul><ul><li>and get some output over a network  </li>...
Why? <ul><li>Guesstimate 3000+ Web Services in Life Science publicly available </li></ul><ul><li>Where… </li></ul>can I fi...
Stakeholders <ul><li>Service providers   </li></ul><ul><li>advertise service </li></ul><ul><li>help with monitoring  </li>...
Content <ul><li>Community contributed </li></ul><ul><ul><li>Service providers </li></ul></ul><ul><ul><li>Third Parties </l...
Curation <ul><li>Free text,  </li></ul><ul><li>Tags, controlled vocabulary </li></ul><ul><li>Automated WSDL ripping and an...
Let’s see Demo
<ul><li>Easy submission of services </li></ul><ul><li>Easy discovery of services </li></ul><ul><li>Better visibility of se...
Alternative interfaces <ul><li>OpenSearch </li></ul><ul><li>iGoogle  </li></ul><ul><li>Facebook  </li></ul><ul><li>Taverna...
Users Services Curation Monitoring Integration test scripts REST API Open Search myExperiment Instances and versioning QoS...
Get Involved <ul><li>Users oriented project  </li></ul><ul><li>Join our friend’s list:  www.biocatalogue.org/wiki   </li><...
Credits Thomas Laurent Hamish McWilliams Franck Tanoh Jiten Bhagat Carole Goble Steve Pettifer Katy Wolstencroft Robert St...
www.biocatalogue.org
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ISMB 2009 Demo Introduction

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Introduction slides for the BioCatalogue demo at ISMB 2009.
Presented by Franck Tanoh and Jiten Bhagat

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ISMB 2009 Demo Introduction

  1. 1. http://www.biocatalogue.org ISMB, 01 July 2009 Franck Tanoh Jiten Bhagat University of Manchester, UK
  2. 2. <ul><li>Public, curated catalogue of Life Science Web Services </li></ul><ul><li>Register, find, curate Web Services </li></ul><ul><li>Share with the community, your colleagues or yourself </li></ul><ul><li>Web 2.0 site and development </li></ul><ul><li>REST API </li></ul><ul><li>Open source code base </li></ul>The BioCatalogue…
  3. 3. Who?
  4. 4. Web Services? <ul><li>A component that you send some inputs to </li></ul><ul><li>and get some output over a network </li></ul><ul><li>Web services from different location can be used together </li></ul><ul><li>Platform independent </li></ul>
  5. 5. Why? <ul><li>Guesstimate 3000+ Web Services in Life Science publicly available </li></ul><ul><li>Where… </li></ul>can I find them? advertise? <ul><li>What… </li></ul>do they do? Can I use them? the cost? the licenses? <ul><li>How… </li></ul>do they work? up to date? <ul><li>Who… </li></ul>provides them? recommends them?
  6. 6. Stakeholders <ul><li>Service providers </li></ul><ul><li>advertise service </li></ul><ul><li>help with monitoring </li></ul><ul><li>Users </li></ul><ul><li>find, use services </li></ul><ul><li>Curators </li></ul><ul><li>professional, community, you! </li></ul><ul><li>Tool developers </li></ul><ul><li>use the BioCatalogue in their application </li></ul>
  7. 7. Content <ul><li>Community contributed </li></ul><ul><ul><li>Service providers </li></ul></ul><ul><ul><li>Third Parties </li></ul></ul><ul><ul><li>You! </li></ul></ul><ul><li>Sourced from partners and registries </li></ul><ul><li>Curators </li></ul>
  8. 8. Curation <ul><li>Free text, </li></ul><ul><li>Tags, controlled vocabulary </li></ul><ul><li>Automated WSDL ripping and analytics </li></ul><ul><li>Automated monitoring & testing </li></ul><ul><li>Partner feeds (e.g. myExperiment) </li></ul>
  9. 9. Let’s see Demo
  10. 10. <ul><li>Easy submission of services </li></ul><ul><li>Easy discovery of services </li></ul><ul><li>Better visibility of services </li></ul><ul><li>Bringing service providers, curators members, users together </li></ul><ul><li>Attribution </li></ul><ul><li>Combining subjective, objective, measurable, social and automated information and metrics </li></ul>
  11. 11. Alternative interfaces <ul><li>OpenSearch </li></ul><ul><li>iGoogle </li></ul><ul><li>Facebook </li></ul><ul><li>Taverna </li></ul><ul><li>myExperiment </li></ul><ul><li>… and yours? </li></ul>
  12. 12. Users Services Curation Monitoring Integration test scripts REST API Open Search myExperiment Instances and versioning QoS feeds notification ratings recommendations Identity management Content Provider engagement Policy identification Taverna Ownership account management BioMoby DAS Next? Curation tools Google gadget RSS/ATOM Try it first Level of curation Feedback providers curators More services Internal messaging www.biocatalogue.org wiki
  13. 13. Get Involved <ul><li>Users oriented project </li></ul><ul><li>Join our friend’s list: www.biocatalogue.org/wiki </li></ul><ul><li>Contact us: [email_address] </li></ul>
  14. 14. Credits Thomas Laurent Hamish McWilliams Franck Tanoh Jiten Bhagat Carole Goble Steve Pettifer Katy Wolstencroft Robert Stevens David De Roure Rodrigo Lopez Eric Nzuobontane
  15. 15. www.biocatalogue.org

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