Health Sciences Libraries: Synergistic Partnerships Jean Song Bioinformationist, Health Sciences Libraries National Center...
HSL Partnerships <ul><li>Human Genetics Liaison </li></ul><ul><li>Bioinformationist </li></ul><ul><li>School of Informatio...
Human Genetics Liaison <ul><li>Person-to-unit collaboration </li></ul><ul><ul><li>Human Genetics Department of the School ...
<ul><li>Organization collaboration </li></ul><ul><ul><li>Health Sciences Libraries </li></ul></ul><ul><ul><li>National Cen...
<ul><li>A National Center for Biomedical Computing (NCBC) </li></ul>National Center for Integrative Biomedical Informatics...
The Bioinformationist <ul><li>Recruitment </li></ul><ul><li>Initial work </li></ul><ul><li>Continued funding for position ...
Internship <ul><li>Organization collaboration </li></ul><ul><ul><li>HSL, NCIBI, School of Information </li></ul></ul><ul><...
Bioinformatics Interest Group <ul><li>Divisional collaboration within the University Library system </li></ul><ul><ul><li>...
BIG Structure <ul><li>Members </li></ul><ul><ul><li>Diverse: Engineering, Biology, Chemistry, NLM Associate Fellow </li></...
Public Health Subcontract <ul><li>Unit collaboration with local governments </li></ul><ul><ul><li>HSL </li></ul></ul><ul><...
Local Public Health 2.0 <ul><li>Goal: best practices for Web 2.0 technologies to improve communication </li></ul><ul><li>O...
HSL Strengths <ul><li>HSL </li></ul><ul><li>Public Hlth depts </li></ul><ul><li>Librarians </li></ul><ul><li>Public Hlth P...
HSL Collaborations School of Medicine AAEL Science Library School of Information Public Health Depts Internship BIG Bioinf...
Clinical and Translational Science Award Consortium <ul><li>Institutional collaboration </li></ul><ul><ul><li>HSL </li></u...
References <ul><li>http:// www.lib.umich.edu/hsl / </li></ul><ul><li>http://www.ncibi.org/ </li></ul><ul><li>http://nnlm.g...
Acknowledgements <ul><li>Health Sciences Libraries  </li></ul><ul><li>National Center for Integrative Biomedical Informati...
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HSL: Synergistic Partnerships

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  • HSL: Synergistic Partnerships

    1. 1. Health Sciences Libraries: Synergistic Partnerships Jean Song Bioinformationist, Health Sciences Libraries National Center for Integrative Biomedical Informatics University of Michigan [email_address] May 18, 2008
    2. 2. HSL Partnerships <ul><li>Human Genetics Liaison </li></ul><ul><li>Bioinformationist </li></ul><ul><li>School of Information Internship </li></ul><ul><li>Bioinformatics Interest Group (BIG) </li></ul><ul><li>Public Health Subcontract </li></ul><ul><li>Clinical and Translational Science Award consortium </li></ul>
    3. 3. Human Genetics Liaison <ul><li>Person-to-unit collaboration </li></ul><ul><ul><li>Human Genetics Department of the School of Medicine </li></ul></ul><ul><ul><li>Established relationship </li></ul></ul><ul><ul><li>Professional appointment with the department </li></ul></ul><ul><ul><li>Tap into external expertise </li></ul></ul><ul><li>Major projects </li></ul><ul><ul><li>NCBI in-house training (e.g. Field Guide, PubChem, BLAST) </li></ul></ul><ul><ul><li>Jackson Laboratory Mouse Genome Informatics in-house training </li></ul></ul><ul><ul><li>Mouse club </li></ul></ul><ul><ul><li>Grant-writing series </li></ul></ul>HSL Human Genetics Librarian School of Medicine
    4. 4. <ul><li>Organization collaboration </li></ul><ul><ul><li>Health Sciences Libraries </li></ul></ul><ul><ul><li>National Center for Integrative Biomedical Informatics </li></ul></ul><ul><li>Pilot </li></ul><ul><li>Purpose: test the viability of a bioinformationist to increase research support in bioinformatics </li></ul>The Bioinformationist
    5. 5. <ul><li>A National Center for Biomedical Computing (NCBC) </li></ul>National Center for Integrative Biomedical Informatics <ul><li>University of Michigan’s Center for Computational Medicine and Biology (CCMB) </li></ul><ul><li>Problem-based tool development applied to Driving Biological Problems </li></ul>
    6. 6. The Bioinformationist <ul><li>Recruitment </li></ul><ul><li>Initial work </li></ul><ul><li>Continued funding for position </li></ul><ul><li>Major projects </li></ul><ul><ul><li>Intellectual property management </li></ul></ul><ul><ul><li>NIH Public Access Policy compliance </li></ul></ul><ul><ul><li>Education Core participation </li></ul></ul><ul><ul><ul><li>Heuristic evaluations </li></ul></ul></ul><ul><ul><ul><li>Needs assessment </li></ul></ul></ul><ul><ul><li>Usability testing participation </li></ul></ul>HSL Bioinform- ationist NCIBI
    7. 7. Internship <ul><li>Organization collaboration </li></ul><ul><ul><li>HSL, NCIBI, School of Information </li></ul></ul><ul><ul><li>Faculty, researcher, student </li></ul></ul><ul><li>Multiple mentors </li></ul><ul><li>Major projects </li></ul><ul><ul><li>Gene name curation </li></ul></ul><ul><ul><li>Citation analysis </li></ul></ul><ul><ul><li>Impact factor assessment </li></ul></ul><ul><ul><li>Tools analysis </li></ul></ul>HSL Internship School of Information
    8. 8. Bioinformatics Interest Group <ul><li>Divisional collaboration within the University Library system </li></ul><ul><ul><li>Science </li></ul></ul><ul><ul><li>Engineering </li></ul></ul><ul><ul><li>Health Sciences Libraries </li></ul></ul><ul><li>Challenges of supporting bioinformatics research </li></ul><ul><ul><li>Multi-disciplinary nature of the field of bioinformatics </li></ul></ul><ul><ul><li>Historical compartmentalization of library services </li></ul></ul><ul><ul><li>Geographic separation of libraries and campuses </li></ul></ul><ul><li>Cannot be achieved by a single person </li></ul><ul><li>Mission: provide innovative resources to support bioinformatics research on campus </li></ul>
    9. 9. BIG Structure <ul><li>Members </li></ul><ul><ul><li>Diverse: Engineering, Biology, Chemistry, NLM Associate Fellow </li></ul></ul><ul><ul><li>Subject and professional expertise: BS, MS, PhD </li></ul></ul><ul><li>Meetings </li></ul><ul><ul><li>Monthly, alternating campuses </li></ul></ul><ul><ul><li>Include informational session </li></ul></ul><ul><li>Major Projects </li></ul><ul><ul><li>NIH Public Access Policy compliance and institutional repository pilot </li></ul></ul><ul><ul><li>NCBI User Services training alternatives development </li></ul></ul><ul><ul><li>Needs assessment for bioinformatics portal development </li></ul></ul>BIG HSL Engineering Science
    10. 10. Public Health Subcontract <ul><li>Unit collaboration with local governments </li></ul><ul><ul><li>HSL </li></ul></ul><ul><ul><li>Genesee and Monroe counties’ health departments </li></ul></ul><ul><li>Creating a Roadmap: Local Public Health 2.0 </li></ul><ul><ul><li>Needs assessment </li></ul></ul><ul><ul><li>Web 2.0 technologies </li></ul></ul><ul><ul><li>Technology integrated projects as examples for other health departments </li></ul></ul>
    11. 11. Local Public Health 2.0 <ul><li>Goal: best practices for Web 2.0 technologies to improve communication </li></ul><ul><li>Objectives </li></ul><ul><ul><li>Needs assessment </li></ul></ul><ul><ul><ul><li>Focus groups </li></ul></ul></ul><ul><ul><ul><li>Surveys </li></ul></ul></ul><ul><ul><li>Training </li></ul></ul><ul><ul><li>Integrate technologies into workflow </li></ul></ul><ul><ul><ul><li>Create technology integrated projects </li></ul></ul></ul><ul><ul><ul><li>Evaluation survey </li></ul></ul></ul><ul><ul><li>Website development </li></ul></ul><ul><ul><ul><li>Wiki based sharing tool </li></ul></ul></ul><ul><ul><ul><li>Usability testing </li></ul></ul></ul>
    12. 12. HSL Strengths <ul><li>HSL </li></ul><ul><li>Public Hlth depts </li></ul><ul><li>Librarians </li></ul><ul><li>Public Hlth Professionals </li></ul>Public Health Depts <ul><li>Engineering Library </li></ul><ul><li>HSL </li></ul><ul><li>Science Library </li></ul><ul><li>School of Information </li></ul><ul><li>Librarians </li></ul><ul><li>NLM Associate Fellow </li></ul><ul><li>Student </li></ul>BIG <ul><li>HSL </li></ul><ul><li>NCIBI </li></ul><ul><li>School of Information </li></ul><ul><li>Developers </li></ul><ul><li>Faculty </li></ul><ul><li>Librarians </li></ul><ul><li>Student </li></ul>Internship <ul><li>HSL </li></ul><ul><li>NCIBI </li></ul><ul><li>Developers </li></ul><ul><li>Faculty </li></ul><ul><li>Librarian </li></ul>Bioinformationist <ul><li>HSL </li></ul><ul><li>External Informatics Institutions </li></ul><ul><li>School of Medicine </li></ul><ul><li>Faculty </li></ul><ul><li>Librarian </li></ul><ul><li>Researchers </li></ul>Human Genetics Librarian Institutional Involvement Partnerships Collaboration Training & Education Outreach & Dissemination Information Access Research & Development
    13. 13. HSL Collaborations School of Medicine AAEL Science Library School of Information Public Health Depts Internship BIG Bioinfor- mationist Human Genetics Librarian HSL NCIBI
    14. 14. Clinical and Translational Science Award Consortium <ul><li>Institutional collaboration </li></ul><ul><ul><li>HSL </li></ul></ul><ul><ul><li>CTSA consortium </li></ul></ul><ul><li>CTSA Goals </li></ul><ul><ul><li>Develop new methods to clinical and translational research </li></ul></ul><ul><ul><li>Improve training and mentoring </li></ul></ul><ul><ul><li>Design clinical research informatics tools </li></ul></ul><ul><ul><li>Assemble interdisciplinary teams </li></ul></ul><ul><ul><li>Forge new partnerships with private and public health care organizations </li></ul></ul><ul><li>HSL involvement </li></ul><ul><ul><li>Community outreach </li></ul></ul><ul><ul><li>Education </li></ul></ul><ul><ul><li>Informatics </li></ul></ul>
    15. 15. References <ul><li>http:// www.lib.umich.edu/hsl / </li></ul><ul><li>http://www.ncibi.org/ </li></ul><ul><li>http://nnlm.gov/gmr/ </li></ul><ul><li>http://www.ctsaweb.org/ </li></ul>
    16. 16. Acknowledgements <ul><li>Health Sciences Libraries </li></ul><ul><li>National Center for Integrative Biomedical Informatics NIH Grant # U54-DA021519 </li></ul><ul><li>National Networks of Libraries of Medicine, Greater Midwest Region, Public Health subcontract NO1-LM-6-3503, CFDA 93.879 between the Board of Trustees of the University of Illinois and the University of Michigan </li></ul>
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