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Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
Bioinformationist@UofM
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  • Transcript

    • 1. University of Michigan Health Sciences Libraries Bioinformatics Support and Education Jean Song University of Michigan [email_address] March 2008
    • 2. Overview
      • The Bioinformationist
        • National Center for Integrative Biomedical Informatics (NCIBI)
        • Core 5
        • Licensing
        • Research
      • Bioinformatics Interest Group (BIG)
        • Workshops
        • Libguide
      • Clinical Translational Science Award (CTSA)
        • CTSA Librarian
        • Projects
      • Future Goals
    • 3. The Bioinformationist
      • Early 2007, pilot project collaboration
      • Health Sciences Libraries and NCIBI
      • Purpose: test the viability of a bioinformationist to increase research support in bioinformatics
      • Recruitment
      • Initial work
      • Position funding
    • 4. Health Sciences Libraries
      • Mission: a valued partner, fully integrated into the work of the university and providing leadership in knowledge management for education, research, patient care, and community outreach
      • Serves School of Medicine, Nursing, Pharmacy, Dentistry, Public Health, University of Michigan Health System
      • Working and historical collection
    • 5. National Center for Integrative Biomedical Informatics
      • A National Center for Biomedical Computing (NCBCs) in the NIH Roadmap
      • University of Michigan’s Center for Computational Medicine and Bioinformatics (CCMB)
      • Problem-centric development based on Driving Biological Projects
    • 6. NCIBI Structure
      • Core 1 – Computer and Information Science
      • Core 2 – Bioinformatics & Knowledge Acquisition
      • Core 3 – Driving Biological Problems
      • Core 4 – Computational Infrastructure
      • Core 5 – Education
      • Core 6 – Outreach and Dissemination
      • Core 7 – Administration
    • 7. Core 5 Support
      • Education
        • Tools documentation
        • Tutorials
        • Tools analysis
      • Usability Analysis
        • User testing
        • Heuristic evaluations
      • Design Analysis
        • Web design
        • Tools design
    • 8. Core 5 Contributions
      • Education
        • Tools documentation
        • Tutorials
        • Tools analysis
      • Usability Analysis
        • User testing
        • Heuristic evaluations
      • Design Analysis
        • Web design
        • Tools design
    • 9. Core 5 Contributions
      • Education
        • Tools documentation
        • Tutorials
        • Tools analysis
      • Usability Analysis
        • User testing
        • Heuristic evaluations
      • Design Analysis
        • Web design
        • Tools design
    • 10. Support Initiatives
      • Licensing
        • Incoming data sources
        • General Terms of Use
        • Outgoing data
      • Scholarly Publishing
        • Open Access Week
        • Natural Language Processing
        • NIH Public Access Policy compliance pilot
      • The Bioinformationista
    • 11.
      • Licensing
        • Incoming data sources
        • General Terms of Use
        • Outgoing data
      • Scholarly Publishing
        • Open Access Week
        • Natural Language Processing
        • NIH Public Access Policy compliance pilot
      • The Bioinformationista
      Support Initiatives
    • 12. Support Initiatives
      • Licensing
        • Incoming data sources
        • General Terms of Use
        • Outgoing data
      • Scholarly Publishing
        • Open Access Week
        • Natural Language Processing
        • NIH Public Access Policy compliance pilot
      • The Bioinformationista
    • 13. Bioinformatics Interest Group
      • Divisional collaboration within the University Library system
        • Science, Health Sciences Libraries, Engineering
      • Challenges of supporting bioinformatics research
        • Multi-disciplinary nature
        • Historical compartmentalization of library services
        • Geographic separation of libraries and campuses
      • Cannot be achieved by a single person
      • Mission: provide innovative resources to support bioinformatics research on campus
      • Meets on alternating campuses with informational session on current bioinformatics topic
    • 14. BIG Support Initiatives
      • NCBI User Services training alternative
        • Collaborated with CCMB
        • Bioinformatics workshops: Field Guide, Powerscripting
        • Future: PubChem, Patents
      • Development of bioinformatics library guide
    • 15. Clinical and Translational Science Award Liaison
      • CTSA Goals
        • Develop new methods to clinical/translational research
        • Improve training and mentoring
        • Design clinical research informatics tools
        • Assemble interdisciplinary teams
        • Forge new partnerships with private and public health care organizations
      • CTSA Liaison Librarian
      • Support Initiatives
        • Infobuttons: drug resources, clinical trials
        • Portal
        • Curriculum committee
    • 16. Partnerships
      • National Center for Integrative Biomedical Informatics (CCMB)
      • Michigan Institute for Clinical and Health Research (CTSA)
      • University Library
      • School of Information
        • Community Informatics, Informatics, HCI
        • Practical Engagement Program
        • Projects
          • Bioinformatics library guide
          • Gene name curation
        • Extended collaboration
          • National Cancer Institute
          • Workshops using NCIBI tools, tutorials, user testing
      • Taubman Medical Research Institute
      • Office of Technology Transfer
      • General Counsel
    • 17. Future Goals
      • Additional partnerships
        • Internal: Schools of Dentistry, Nursing, Pharmacy, Public Health
        • External: Public health practice professionals, information specialists
      • Collaborative research
        • Funding
        • Grant applications
        • Integral team member
        • Citation analysis, research productivity
      • Education
        • Curriculum integration
        • Workshops
    • 18. Acknowledgements
      • Health Sciences Libraries
      • National Center for Integrative Biomedical Informatics NIH Grant #U54-DA021519
    • 19. MICHR
      • Collaboration of over 30 schools, departments and centers
      • 12 cores
        • Clinical translational science
        • Pilot and collaborative grants
        • Biomedical informatics
        • Biostatistics
        • Ethics
        • Regulatory knowledge and support
        • MCRU (Michigan clinical research unit)
        • Community engagement
        • Technical cores program
        • Health disparities research
        • Pediatrics (consultation on inclusion of pediatric populations)
        • Education career development and mentoring

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