080807

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080807

  1. 1. 20 DB 2008/08/07 kaneko.satoko(at)ocha.ac.jp
  2. 2. molecular_function [GO:0003674] molecular transducer activity [GO:0060089] signal transducer activity [GO:0004871] receptor activity [GO:0004872] transmembrane receptor activity [GO:0004888] G-protein coupled receptor activity [GO:0004930] rhodopsin-like receptor activity [GO:0001584]
  3. 3. 22.66kb Reverse strand 8 exons, CDS 1446bp (481a.a.)
  4. 4. (5) processed (pseudo)gene, unprocessed (pseudo)gene a a' unprocessed gene duplicated gene a mRNA splicing a'' processed gene pseudogene premature stop codon (insertion) (deletion)
  5. 5. ID ID
  6. 6. 1 [apple mark+C] 2 CotEditor [apple mark+V] makorin.fasta blat 3 BLAST
  7. 7. 1 [apple mark+V] 2 Mus musculus dna database 3 Search Tool BLAT RUN BLAT
  8. 8. [apple mark+A] [apple mark+C] CotEditor [apple mark +C] makorin.blat
  9. 9. [Alignment Locations vs. Karyotype] [Alignment Locations vs. Query] query [Alignment Summary] query
  10. 10. query
  11. 11. (6) BLAST (Basic Local Alignment Search Tool) alignment Arg Ser Val Thr Ser Gly Tyr Val Arg 5'-tacgtcaggta-3' 3'-atgcagtccat-5' Met Gln Ser Cys Ser Pro Ala Val His BLAT (Blast Like Alignment Tool) query/database 4,11(amino acid, DNA)-mer EST

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