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Problems	
  with	
  Transla1on

   Kerry	
  L.	
  Blanchard,	
  PhD,	
  MD
坐井观天
My	
  transla1on	
  +	
  Google
坐井观天          =    Sit	
  Well	
  Look	
  Sky
The	
  Context
             	
  
            A	
  li&le	
  frog	
  lived	
  in	
  the	
  well	
  and	
  
            thought	
  the	
  whole	
  world	
  was	
  the	
  
            well.	
  He	
  thinks	
  he	
  is	
  the	
  smartest	
  
            frog	
  in	
  the	
  world.	
  Later	
  on	
  the	
  frog	
  
            receives	
  a	
  visit	
  from	
  a	
  li&le	
  bird	
  
            who	
  has	
  flown	
  to	
  the	
  well	
  from	
  a	
  
            long	
  distance.	
  The	
  frog	
  realizes	
  
            how	
  blind	
  he	
  had	
  been,	
  and	
  the	
  
            fact	
  that	
  there’s	
  a	
  whole	
  new	
  
            world	
  out	
  there	
  yet	
  to	
  discover.	
  
            The	
  frog,	
  ‘opens’	
  his	
  eyes	
  to	
  the	
  
            reality	
  of	
  his	
  trapped	
  situaDon.	
  




                                                                       4	
  
坐 井 观 天
  Zuo	
  Jing	
  Guan	
  Tian
 To	
  have	
  tunnel	
  vision
Big	
  fish	
  in	
  a	
  liJle	
  pond
       大 鱼 小 池
Something	
  a	
  li&le	
  bit	
  scary

          Zuo	
  Jing	
  Guan	
  Tian


           昨鲸管田
Yesterday	
  a	
  whale	
  managed	
  a	
  field
The	
  Story
                                     	
•    Two	
  observers	
  see	
  the	
  same	
  data	
  	
  
•    Each	
  observer	
  has	
  a	
  different	
  impression	
  
•    Both	
  impressions	
  have	
  elements	
  of	
  truth	
  
•    Both	
  impressions	
  have	
  elements	
  of	
  untruth	
  
•    Neither	
  is	
  correct	

    The voyage of discovery is not in seeking
 new landscapes but in having new eyes…Marcel Proust 	

                                                                    7	
  
Lessons
•    Language	
  is	
  a	
  set	
  of	
  symbols	
  
•    Symbols	
  describe	
  our	
  percep1on	
  of	
  reality	
  
•    Transla1on	
  changes	
  one	
  language	
  to	
  another	
  
•    Deciphering	
  symbols	
  is	
  mechanical	
  
•    Meaning	
  is	
  oRen	
  lost	
  in	
  transla1on	
  
•    Understanding	
  reality	
  requires	
  context	
  

     Like many intellectuals, he was incapable
 of saying a simple thing in a simple way…Marcel Proust
What is “translation”?
Interpreting? Chinese to English

Converting? RNA information to protein structure

Decoding? Target to biology to drug to disease

Nonrotational displacement? “a no-spin zone”


           To render in another language



                                                   9
What is translational research?



Translational research is the
holistic rendering of the
interactions between
patients, diseases, targets
and drugs.




                                  10
Why we need translational research:
Complexities in drug development


Target/pathway biology is complex

Drugs have multiple mechanisms

Disease definition is imprecise

Patients with the same disease are
different


            Clinical samples define clinical relevance


                                                         11
Disease classification is imprecise
Lack of known recognized etiologic agent or event
Confusion of syndromes with disease
Lack of “gold standard” diagnostic criteria
Existence of common final pathophysiologic mechanisms
•    Congestive heart failure
•    Chronic renal failure
•    Cirrhosis
•    Chronic obstructive pulmonary disease




                                                        12
Patients with the same disease are
different
Genetic background
•  Disease modification
•  Drug metabolism
•  Toxicity


Medical background
•    Concomitant diseases

Environmental background
•  Concomitant drugs
•  Exposures, e.g tobacco, alcohol, illicit drug use




                                                       13
Translational Research is not:
Profiling of compounds in animals or patients

Looking for responders to a drug

Finding diseases for a drug

Mindless sequencing or chipping

Tissue banking




                                                14
Translation Research can:
Clinical Benefits:
•  Reduce the diversity within a clinical syndrome
•  Eliminate patients who can’t respond to a drug
•  Optimize the risk/benefit ratio
•  Provide appropriate surrogate biomarkers for drug activity


Discovery Benefits:
•  Link a disease with an important biologic process
•  Help find drugs for diseases



             We must never be afraid to go
          too far, for truth lies beyond…Marcel Proust	
                                                                15
Frequency in tumor
              samples to date
            Breast 6/61 (8%)
            Colon   3/51 (6%)
            Ovary 1/50 (2%)
E17K
(G>A)
                                  The mutation is:
        E17K = Charge Reversal    • Somatic
                                  • Heterozygous
                                  • Recurring
AKT1 E17K Learnings
Sentry glutamate hypothesis

Pathologic membrane localization
•    Plasma membrane localization in absence of PIP3
•    80X increase in binding to PIP2; 100X more PIP2 than PIP3
•    AKT activation in the absence of PI3K activity

Patient segregation by PI3K/AKT/mTOR status
•    Response to particular drugs
•    Where in the PI3K/AKT/mTOR pathway
•    Disease natural history

Somatic mutation in non-cancer diseases
•    Proteus syndrome (AKT1)
•    Beckwith Wiedemann syndrome with hemihypertrophy (AKT2)
•    Hemispheric Developmental Brain Malformations (AKT3)
                                                                 17
PHDi




       18	
  
N Engl J Med. 2011 Aug 18;365(7):611-9.
                                      	




                                           Neuron 74, 41–48, April 12, 2012
                                                                          	




  Science. 2011 Oct 28;334(6055):474.
The quest for
disease-modifying drugs


                   Drugs
  Targets   Pathways   Disease   Patients




               Biomarkers
                                            20

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Kerry Blanchard Shanghai Biof

  • 1. Problems  with  Transla1on Kerry  L.  Blanchard,  PhD,  MD
  • 3. My  transla1on  +  Google 坐井观天 = Sit  Well  Look  Sky
  • 4. The  Context   A  li&le  frog  lived  in  the  well  and   thought  the  whole  world  was  the   well.  He  thinks  he  is  the  smartest   frog  in  the  world.  Later  on  the  frog   receives  a  visit  from  a  li&le  bird   who  has  flown  to  the  well  from  a   long  distance.  The  frog  realizes   how  blind  he  had  been,  and  the   fact  that  there’s  a  whole  new   world  out  there  yet  to  discover.   The  frog,  ‘opens’  his  eyes  to  the   reality  of  his  trapped  situaDon.   4  
  • 5. 坐 井 观 天 Zuo  Jing  Guan  Tian To  have  tunnel  vision Big  fish  in  a  liJle  pond 大 鱼 小 池
  • 6. Something  a  li&le  bit  scary Zuo  Jing  Guan  Tian 昨鲸管田 Yesterday  a  whale  managed  a  field
  • 7. The  Story •  Two  observers  see  the  same  data     •  Each  observer  has  a  different  impression   •  Both  impressions  have  elements  of  truth   •  Both  impressions  have  elements  of  untruth   •  Neither  is  correct The voyage of discovery is not in seeking new landscapes but in having new eyes…Marcel Proust 7  
  • 8. Lessons •  Language  is  a  set  of  symbols   •  Symbols  describe  our  percep1on  of  reality   •  Transla1on  changes  one  language  to  another   •  Deciphering  symbols  is  mechanical   •  Meaning  is  oRen  lost  in  transla1on   •  Understanding  reality  requires  context   Like many intellectuals, he was incapable of saying a simple thing in a simple way…Marcel Proust
  • 9. What is “translation”? Interpreting? Chinese to English Converting? RNA information to protein structure Decoding? Target to biology to drug to disease Nonrotational displacement? “a no-spin zone” To render in another language 9
  • 10. What is translational research? Translational research is the holistic rendering of the interactions between patients, diseases, targets and drugs. 10
  • 11. Why we need translational research: Complexities in drug development Target/pathway biology is complex Drugs have multiple mechanisms Disease definition is imprecise Patients with the same disease are different Clinical samples define clinical relevance 11
  • 12. Disease classification is imprecise Lack of known recognized etiologic agent or event Confusion of syndromes with disease Lack of “gold standard” diagnostic criteria Existence of common final pathophysiologic mechanisms •  Congestive heart failure •  Chronic renal failure •  Cirrhosis •  Chronic obstructive pulmonary disease 12
  • 13. Patients with the same disease are different Genetic background •  Disease modification •  Drug metabolism •  Toxicity Medical background •  Concomitant diseases Environmental background •  Concomitant drugs •  Exposures, e.g tobacco, alcohol, illicit drug use 13
  • 14. Translational Research is not: Profiling of compounds in animals or patients Looking for responders to a drug Finding diseases for a drug Mindless sequencing or chipping Tissue banking 14
  • 15. Translation Research can: Clinical Benefits: •  Reduce the diversity within a clinical syndrome •  Eliminate patients who can’t respond to a drug •  Optimize the risk/benefit ratio •  Provide appropriate surrogate biomarkers for drug activity Discovery Benefits: •  Link a disease with an important biologic process •  Help find drugs for diseases We must never be afraid to go too far, for truth lies beyond…Marcel Proust 15
  • 16. Frequency in tumor samples to date Breast 6/61 (8%) Colon 3/51 (6%) Ovary 1/50 (2%) E17K (G>A) The mutation is: E17K = Charge Reversal • Somatic • Heterozygous • Recurring
  • 17. AKT1 E17K Learnings Sentry glutamate hypothesis Pathologic membrane localization •  Plasma membrane localization in absence of PIP3 •  80X increase in binding to PIP2; 100X more PIP2 than PIP3 •  AKT activation in the absence of PI3K activity Patient segregation by PI3K/AKT/mTOR status •  Response to particular drugs •  Where in the PI3K/AKT/mTOR pathway •  Disease natural history Somatic mutation in non-cancer diseases •  Proteus syndrome (AKT1) •  Beckwith Wiedemann syndrome with hemihypertrophy (AKT2) •  Hemispheric Developmental Brain Malformations (AKT3) 17
  • 18. PHDi 18  
  • 19. N Engl J Med. 2011 Aug 18;365(7):611-9. Neuron 74, 41–48, April 12, 2012 Science. 2011 Oct 28;334(6055):474.
  • 20. The quest for disease-modifying drugs Drugs Targets Pathways Disease Patients Biomarkers 20