Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding visualization toolkit (for 3D images) and a plug-in for uploading queries)

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MIRAGE 2011:
RepoFringe 2011
August 4, 2011
Xiaohong (Sharon) Gao
Yu (Jade) Qian
Middlesex University
London NW4 4BT
Repository @
http://image.mdx.ac.uk/vin/demo.php.

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Contents
Project communications
Dissemination
Progress so far
Next stage of work
Summary
Demo + Technical details

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1. Project communication (1)
Built on MIRAGE and MIRAGE 2011 – an FP7 People Marie Curie project WIDTH has been founded, which started on May 16, 2011.
WIDTH – Warehousing images in the digital hospital: interpretation, infrastructure, and integration.
Funding Scheme – staff exchange
project partners – 11 in total

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- Disciplinary-based repository:
IRMA – for bone age assessment (Germany)
http://ganymed.imib.rwth-aachen.de/irma/index_en.php

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- Disciplinary-based repository:
HRCT – for lung (Switzerland)
- http://www.radiologyassistant.nl/en/42d94cd0c326b

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- Semantic-based repository:
i-SCoRe – (Greece)
- http://www.medas.gr:8084/iscore

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2. Disseminations
X. Gao, Y, Qian, R. Hui, The State of the Art of Medical Imaging Technology: from Creation to Archive and Back, The Open Medical Informatics Journal, 5 : 93-85, 2011.
Y. Qian, X. Gao , M. Loomes, R. Comley, B. Barn, R. Hui, Z. Tian,Content-based Retrieval of 3D Medical Images,eTELEMED2011, February, 2011.
(Best paper award, has been invited to be extended to a journal paper by August 15).

3. X.W., Gao, Y. Qian, M. Loomes, R. Comley, B. Barn, A. Chapman, J. Rix, Texture-based 3D image retrieval for medical applications, IADIS e-Health2010, Freiburg, Germany, 29-31, July 2010.

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3. Enlarged Project Team
Two BioMed MSc students are working with us doing their final dissertations based on MRIAGE database.
Working on the evaluation of classification of images.
Working on user studies.
2. One PhD student working on Path planning for neurosurgery.
Who used to be a neur-surgeon.

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4. Progress -- 3D Image retrieval (1) – adopting ParaView methodology

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4. Uploading images (2)

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5. Next stage of work
1. Digest 2D/3D Movie data.
2. User evaluations.
3. Reporting.
UltrasonixTABLET
Ultrasound scanner
MDX Grid Computing

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6. Summary
From students’ point of view, this repository has widened both their expectations and experiences, helping them to a large extent.
For us, the developers, it has been a great experience.

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Technical Aspects of MIRAGE

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7. MIRAGE
(Middlesex medical Image Repository with a CBIR ArchivinGEnvironment)
Phase 1(Apr.2009-Sep.2010):MIRAGE – from creationtoarchiving
1)Middlesex medical image Repository: 100,000 2D images and 100 3D images
2) CBIR archiving environment: GIFTframework
Phase 2(Feb-Oct,2011):MIRAGE 2011 – from archiving to creation
1) 3D viewer
2) Upload images
Framework of MIRAGE:

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8. 3D Image retrieval (1) - interface
Montage
MIRAGE
MIRAGE 2011

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8. 3D Image retrieval (2) – adopting ParaView methodology
3D retrieval:
Evaluate four 3D texture methods and detail in the published conference and journal papers.

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9. Image upload(1) - interface
MIRAGE
MIRAGE2011

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9. Image upload(2) – framework of query by upload image

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10: MIRAGE system for wallpaper image retrieval

Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding visualization toolkit (for 3D images) and a plug-in for uploading queries)

by Repository Fringe on Aug 10, 2011

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Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding visualization toolkit (for 3D images) and a plug-in for uploading queries) — Presentation Transcript