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Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding visualization toolkit (for 3D images) and a plug-in for uploading queries)
 

Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding visualization toolkit (for 3D images) and a plug-in for uploading queries)

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Presentation given at Repository Fringe 2011.

Presentation given at Repository Fringe 2011.

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    Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding visualization toolkit (for 3D images) and a plug-in for uploading queries) Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding visualization toolkit (for 3D images) and a plug-in for uploading queries) Presentation Transcript

    • JISC
      MIRAGE 2011:
      RepoFringe 2011
      August 4, 2011
      Xiaohong (Sharon) Gao
      Yu (Jade) Qian
      Middlesex University
      London NW4 4BT
      Repository @
      http://image.mdx.ac.uk/vin/demo.php.
    • JISC
      Contents
      • Project communications
      • Dissemination
      • Progress so far
      • Next stage of work
      • Summary
      • Demo + Technical details
    • JISC
      1. Project communication (1)
      • Built on MIRAGE and MIRAGE 2011 – an FP7 People Marie Curie project WIDTH has been founded, which started on May 16, 2011.
      • WIDTH – Warehousing images in the digital hospital: interpretation, infrastructure, and integration.
      • Funding Scheme – staff exchange
      • project partners – 11 in total
    • JISC
      1. Project communication (2)
      - Disciplinary-based repository:
      • IRMA – for bone age assessment (Germany)
      • http://ganymed.imib.rwth-aachen.de/irma/index_en.php
    • JISC
      1. Project communication (3)
      - Disciplinary-based repository:
      • HRCT – for lung (Switzerland)
      - http://www.radiologyassistant.nl/en/42d94cd0c326b
    • JISC
      JISC
      1. Project communication (5)
      - Semantic-based repository:
      • i-SCoRe – (Greece)
      - http://www.medas.gr:8084/iscore
    • JISC
      2. Disseminations
      X. Gao, Y, Qian, R. Hui, The State of the Art of Medical Imaging Technology: from Creation to Archive and Back, The Open Medical Informatics Journal, 5 : 93-85, 2011.
      Y. Qian, X. Gao , M. Loomes, R. Comley, B. Barn, R. Hui, Z. Tian,Content-based Retrieval of 3D Medical Images,eTELEMED2011, February, 2011.
      (Best paper award, has been invited to be extended to a journal paper by August 15).
       
      3. X.W., Gao, Y. Qian, M. Loomes, R. Comley, B. Barn, A. Chapman, J. Rix, Texture-based 3D image retrieval for medical applications, IADIS e-Health2010, Freiburg, Germany, 29-31, July 2010.
    • JISC
      3. Enlarged Project Team
      Two BioMed MSc students are working with us doing their final dissertations based on MRIAGE database.
      • Working on the evaluation of classification of images.
      • Working on user studies.
      2. One PhD student working on Path planning for neurosurgery.
      • Who used to be a neur-surgeon.
    • JISC
      4. Progress -- 3D Image retrieval (1) – adopting ParaView methodology
    • JISC
      4. Uploading images (2)
    • JISC
      5. Next stage of work
      1. Digest 2D/3D Movie data.
      2. User evaluations.
      3. Reporting.
      UltrasonixTABLET
      Ultrasound scanner
      MDX Grid Computing
    • JISC
      6. Summary
      From students’ point of view, this repository has widened both their expectations and experiences, helping them to a large extent.
      For us, the developers, it has been a great experience.
    • JISC
      Technical Aspects of MIRAGE
    • JISC
      7. MIRAGE
      (Middlesex medical Image Repository with a CBIR ArchivinGEnvironment)
      • Phase 1(Apr.2009-Sep.2010):MIRAGE – from creationtoarchiving
      1)Middlesex medical image Repository: 100,000 2D images and 100 3D images
      2) CBIR archiving environment: GIFTframework
      • Phase 2(Feb-Oct,2011):MIRAGE 2011 – from archiving to creation
      1) 3D viewer
      2) Upload images
      Framework of MIRAGE:
    • JISC
      JISC
      8. 3D Image retrieval (1) - interface
      Montage
      MIRAGE
      MIRAGE 2011
    • JISC
      JISC
      JISC
      8. 3D Image retrieval (2) – adopting ParaView methodology
      • 3D retrieval:
      Evaluate four 3D texture methods and detail in the published conference and journal papers.
    • JISC
      9. Image upload(1) - interface
      MIRAGE
      MIRAGE2011
    • JISC
      9. Image upload(2) – framework of query by upload image
    • JISC
      JISC
      10: MIRAGE system for wallpaper image retrieval
    • JISC