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Slides from 30 minute talk given at Biodiversity Informatics meeting in Stockholm, 3 Decemer 2008

Slides from 30 minute talk given at Biodiversity Informatics meeting in Stockholm, 3 Decemer 2008

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  • 1.  
  • 2. Biol. J. Linn. Soc. 80 (4) 699-715 (2003)
  • 3. http://bioguid.info/openurl/
  • 4. doi:10.1111/j.1095-8312.2003.00274.x
  • 5.  
  • 6. Following the links
  • 7.  
  • 8. Identifiers
  • 9. Resolvable
  • 10. Shared
  • 11. NCBI
  • 12.  
  • 13.  
  • 14.  
  • 15. Cites 2006 2006
  • 16. Forward Cites 2006 2008
  • 17.  
  • 18. Where do we stand?
  • 19. Lack of identifiers
  • 20.  
  • 21.  
  • 22.  
  • 23. Too many identifiers
  • 24. Dolomedes tenebrosus Hentz, 1844 uBio urn:lsid:ubio.org:namebank:2072956 Catalogue of Life urn:lsid:catalogueoflife.org:taxon:f3b7cf14-29c1-102b-9a4a-00304854f820:ac2008 The World Spider Catalogue urn:lsid:amnh.org:spidersp:019664 http://ispiders.blogspot.com
  • 25. Non-standard identifiers
  • 26. urn:nbn:se:uu:diva-3634
  • 27. Life Science Identifiers (LSIDS)
  • 28. urn:lsid:zoobank.org:pub:3F97F9F1-3156-4D30-AD7C-1F5BF51DD609
  • 29. <?xml version=&quot;1.0&quot;?> <rdf:RDF> <PublicationCitation:PublicationCitation rdf:nodeID=&quot;urn:lsid:zoobank.org:pub:3F97F9F1-3156-4D30-AD7C-1F5BF51DD609&quot;> <PublicationCitation:publicationType rdf:resource=&quot;JournalArticle&quot; /> <PublicationCitation:parentPublication rdf:resource=&quot; urn:lsid:zoobank.org:pub:4BE0C73B-4560-40ED-83F8-1FA72D588990 &quot; /> <ns:identifier> urn:lsid:zoobank.org:pub:3F97F9F1-3156-4D30-AD7C-1F5BF51DD609 </ns:identifier> <PublicationCitation:authorship>Polaszek, Andrew, …</PublicationCitation:authorship> <PublicationCitation:year>2005</PublicationCitation:year> <PublicationCitation:title>Commentary: A universal register for animal names</PublicationCitation:title> <PublicationCitation:parentPublicationString>Nature</PublicationCitation:parentPublicationString> <PublicationCitation:volume>437</PublicationCitation:volume> <PublicationCitation:pages>477</PublicationCitation:pages> </PublicationCitation:PublicationCitation> <PublicationCitation:PublicationTypeTerm rdf:about=&quot;JournalArticle&quot; /> <PublicationCitation:PublicationCitation rdf:about=&quot; urn:lsid:zoobank.org:pub:4BE0C73B-4560-40ED-83F8-1FA72D588990 &quot; /> </rdf:RDF>
  • 30. doi:10.1038/437477a
  • 31.  
  • 32. failure to reuse existing identifiers
  • 33. data silo
  • 34. dead end
  • 35. Kanakysaurus viviparus
  • 36.  
  • 37. doi:10.1670/196-03A
  • 38.  
  • 39.  
  • 40. failure to reuse existing identifiers
  • 41. Distributed data
  • 42.  
  • 43. bioguid.info/status/
  • 44.  
  • 45.  
  • 46. Smithsonian National Museum of Natural History 4 days
  • 47. 4 days
  • 48. 90 days
  • 49. GBIF Portal (data.gbif.org) 4 days
  • 50. Where we stand
    • Too few identifiers
    • Too many identifiers
    • Idiosyncratic choice of identifier (LSID)
    • Failure to reuse existing identifiers (DOI)
    • Poor stability of services
    • Errors with no easy means of fixing them

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