Why aren't we there yet?

697 views

Published on

Slides from 30 minute talk given at Biodiversity Informatics meeting in Stockholm, 3 Decemer 2008

Published in: Education
1 Comment
0 Likes
Statistics
Notes
  • And don´t forget to visit Uncle Garys site: http://www.slideshare.net/unclegaryfromsweden You are very welcome!
       Reply 
    Are you sure you want to  Yes  No
    Your message goes here
  • Be the first to like this

No Downloads
Views
Total views
697
On SlideShare
0
From Embeds
0
Number of Embeds
3
Actions
Shares
0
Downloads
9
Comments
1
Likes
0
Embeds 0
No embeds

No notes for slide

Why aren't we there yet?

  1. 2. Biol. J. Linn. Soc. 80 (4) 699-715 (2003)
  2. 3. http://bioguid.info/openurl/
  3. 4. doi:10.1111/j.1095-8312.2003.00274.x
  4. 6. Following the links
  5. 8. Identifiers
  6. 9. Resolvable
  7. 10. Shared
  8. 11. NCBI
  9. 15. Cites 2006 2006
  10. 16. Forward Cites 2006 2008
  11. 18. Where do we stand?
  12. 19. Lack of identifiers
  13. 23. Too many identifiers
  14. 24. Dolomedes tenebrosus Hentz, 1844 uBio urn:lsid:ubio.org:namebank:2072956 Catalogue of Life urn:lsid:catalogueoflife.org:taxon:f3b7cf14-29c1-102b-9a4a-00304854f820:ac2008 The World Spider Catalogue urn:lsid:amnh.org:spidersp:019664 http://ispiders.blogspot.com
  15. 25. Non-standard identifiers
  16. 26. urn:nbn:se:uu:diva-3634
  17. 27. Life Science Identifiers (LSIDS)
  18. 28. urn:lsid:zoobank.org:pub:3F97F9F1-3156-4D30-AD7C-1F5BF51DD609
  19. 29. <?xml version=&quot;1.0&quot;?> <rdf:RDF> <PublicationCitation:PublicationCitation rdf:nodeID=&quot;urn:lsid:zoobank.org:pub:3F97F9F1-3156-4D30-AD7C-1F5BF51DD609&quot;> <PublicationCitation:publicationType rdf:resource=&quot;JournalArticle&quot; /> <PublicationCitation:parentPublication rdf:resource=&quot; urn:lsid:zoobank.org:pub:4BE0C73B-4560-40ED-83F8-1FA72D588990 &quot; /> <ns:identifier> urn:lsid:zoobank.org:pub:3F97F9F1-3156-4D30-AD7C-1F5BF51DD609 </ns:identifier> <PublicationCitation:authorship>Polaszek, Andrew, …</PublicationCitation:authorship> <PublicationCitation:year>2005</PublicationCitation:year> <PublicationCitation:title>Commentary: A universal register for animal names</PublicationCitation:title> <PublicationCitation:parentPublicationString>Nature</PublicationCitation:parentPublicationString> <PublicationCitation:volume>437</PublicationCitation:volume> <PublicationCitation:pages>477</PublicationCitation:pages> </PublicationCitation:PublicationCitation> <PublicationCitation:PublicationTypeTerm rdf:about=&quot;JournalArticle&quot; /> <PublicationCitation:PublicationCitation rdf:about=&quot; urn:lsid:zoobank.org:pub:4BE0C73B-4560-40ED-83F8-1FA72D588990 &quot; /> </rdf:RDF>
  20. 30. doi:10.1038/437477a
  21. 32. failure to reuse existing identifiers
  22. 33. data silo
  23. 34. dead end
  24. 35. Kanakysaurus viviparus
  25. 37. doi:10.1670/196-03A
  26. 40. failure to reuse existing identifiers
  27. 41. Distributed data
  28. 43. bioguid.info/status/
  29. 46. Smithsonian National Museum of Natural History 4 days
  30. 47. 4 days
  31. 48. 90 days
  32. 49. GBIF Portal (data.gbif.org) 4 days
  33. 50. Where we stand <ul><li>Too few identifiers </li></ul><ul><li>Too many identifiers </li></ul><ul><li>Idiosyncratic choice of identifier (LSID) </li></ul><ul><li>Failure to reuse existing identifiers (DOI) </li></ul><ul><li>Poor stability of services </li></ul><ul><li>Errors with no easy means of fixing them </li></ul>

×