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Swan Annotation Tool - Text Mining

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Swan Annotation Framework: running text mining services and curating the results.

Swan Annotation Framework: running text mining services and curating the results.

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    Swan Annotation Tool - Text Mining Swan Annotation Tool - Text Mining Presentation Transcript

    • SWAN Annotation Framework and Text Mining Services
      Paolo Ciccarese, PhD
      Oct 25, 2010
      paolo.ciccarese@gmail.com
      1
      Mass General Hospital
      Harvard Medical School
    • Running text mining services
      2
    • 3 – Loading a news
    • 4 – Selecting one or more of the available text mining services
    • 5 – Running the selected text mining services
    • 6 – Display of the results
    • 7 – List of the results in the summary panel
    • 8 – Display of items in text through the summary panel
    • 9 - Sets summary panel
    • 10 – Display of all the items belonging to the selected set
    • 11 – Curation of one annotation item
    • 12 – The returned term is too broad
    • 13 – Introducing a comment in the curation token
    • 14 – Applying the curation token
    • 15 – Another example of curation
    • 16 – Another example of curation
    • 17 – First term is an exact match
    • Extending the automatically generated set
      18
    • 19 – For adding annotation on the text span ‘APP’ it is necessary to select the text and…
    • 20 - … attach the right term
    • 21 – New annotation added to the NCBO result set
    • 22 – Displaying the new annotation in context
    • 23 – Displaying all the items of the set