AlzSWAN, HyQueand nanopublications<br />An example:<br />Claim #1: Intramembranous Aβ behaves as chaperones of other membr...
A claim taken from AlzSWAN<br />URL: http://tinyurl.com/4h2am3a<br />
The claim by the author in SWAN<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intr...
Claim in a graph with authorship<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Int...
Adding provenance [1]<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranou...
Adding provenance [2]<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranou...
Author’s evidence<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranous Aβ...
Adding provenance<br />G1<br />swanrel:referencesAsSupportiveEvidence<br /><http://example.info/citation/1><br />G5<br />p...
Translating the claim into HyQue-triples<br /><http://example.info/alzswan:statement_f3556dcfc331d9b9af9d5c0cfc570ba6_even...
Adding the provenance<br />Hyque triples<br />G8<br />pav:contributedBy<br /><http://example.info/person/2><br />G9<br />r...
Connecting SWAN Claim and Hyque triples<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<b...
SWAN, HyQue and Nanopublications
SWAN, HyQue and Nanopublications
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SWAN, HyQue and Nanopublications

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Claim #1: Intramembranous Aβ behaves as chaperones of other membrane proteins

An example of application of the nanopublications approach to represent AlzSWAN content.

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Transcript of "SWAN, HyQue and Nanopublications"

  1. 1. AlzSWAN, HyQueand nanopublications<br />An example:<br />Claim #1: Intramembranous Aβ behaves as chaperones of other membrane proteins<br />Paolo Ciccarese, PhD<br />February 25, 2011<br />
  2. 2. A claim taken from AlzSWAN<br />URL: http://tinyurl.com/4h2am3a<br />
  3. 3. The claim by the author in SWAN<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranous Aβ behaves as chaperones of other membrane proteins<br />swan-de: http://purl.org/swan/2.0/discourse-elements/<br />dct: http://purl.org/dc/terms/<br />
  4. 4. Claim in a graph with authorship<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranous Aβ behaves as chaperones of other membrane proteins<br />G1<br />pav:authoredBy<br /><http://example.info/person/1><br />G2<br />rdf:type<br />foaf:name<br />Vincent Marchesi<br />foaf:Person<br />pav: http://purl.org/pav/provenance/2.0/ <br />foaf: http://xmlns.com/foaf/0.1/<br />
  5. 5. Adding provenance [1]<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranous Aβ behaves as chaperones of other membrane proteins<br />G1<br />pav:curatedBy<br /><http://example.info/person/0><br />G3<br />rdf:type<br />foaf:name<br />Gwen Wong<br />foaf:Person<br />
  6. 6. Adding provenance [2]<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranous Aβ behaves as chaperones of other membrane proteins<br />G1<br />pav:authoredBy<br /><http://example.info/person/1><br />G2<br />pav:curatedBy<br /><http://example.info/person/0><br />G4<br />rdf:type<br />foaf:name<br />Gwen Wong<br />foaf:Person<br />
  7. 7. Author’s evidence<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranous Aβ behaves as chaperones of other membrane proteins<br />G1<br />swanrel:referencesAsSupportiveEvidence<br /><http://example.info/citation/1><br />G5<br />pav:contributedBy<br /><http://example.info/person/1><br />G6<br />
  8. 8. Adding provenance<br />G1<br />swanrel:referencesAsSupportiveEvidence<br /><http://example.info/citation/1><br />G5<br />pav:contributedBy<br /><http://example.info/person/1><br />G6<br />pav:curatedBy<br /><http://example.info/person/0><br />G7<br />
  9. 9. Translating the claim into HyQue-triples<br /><http://example.info/alzswan:statement_f3556dcfc331d9b9af9d5c0cfc570ba6_event_1><br />Event of type GO "chaperone binding"<br />rdfs:label<br />rdf:type<br /><http://bio2rdf.org/go:0051087><br /><prefix:actor_1><br /><http://bio2rdf.org/chebi:53002><br />rdf:type<br />rdfs:label “Beta amyloid”<br /><prefix:target_1><br /><http://bio2rdf.org/mesh:D008565><br />rdf:type<br />rdfs:label “Membrane protein”<br /><http://bio2rdf.org/go:0005886><br /><prefix:location_1><br />rdf:type<br />rdfs:label “Plasma membrane”<br />G8<br />Triples provided by Nigam Shah<br />
  10. 10. Adding the provenance<br />Hyque triples<br />G8<br />pav:contributedBy<br /><http://example.info/person/2><br />G9<br />rdf:type<br />foaf:name<br />Nigam Shah<br />foaf:Person<br />
  11. 11. Connecting SWAN Claim and Hyque triples<br />rdf:type<br /><http://tinyurl.com/4h2am3a><br />swande:Claim<br />dct:title<br />Intramembranous Aβ behaves as chaperones of other membrane proteins<br />G1<br />swanrel:derivedFrom<br />G8<br />Hyque triples<br />

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