09   12   6   1
09   12   6   2
09   12   6   3
DDBJ 1,000                              1




               http://www.ddbj.nig.ac.jp/images/breakdown_stats/DBGrowth-e.g...
20000000.00




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                                               1,9...
10,000   300
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09   12   6                     6
09   12   6   7
09   12   6   8
09   12   6   9
09   12   6   10
09   12   6   11
→



09   12   6       12
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09   12   6   20
≠

09   12   6       21
09   12   6   22
09   12   6   23
09   12   6   24
09   12   6   25
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09   12   6            26
09   12   6   27
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09   12   6                      28
09   12   6   29
09   12   6   30
09   12   6   31
09   12   6   32
09   12   6   33
3D

09   12   6        34
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09   12   6   49
09   12   6   50
•
              •
              •


09   12   6       51
09   12   6   52
09   12   6   53
09   12   6   54
09   12   6   55
09   12   6   56
09   12   6   57
09   12   6   58
09   12   6   59
09   12   6   60
09   12   6   61
09   12   6   62
09   12   6   63
CC-BY




09   12   6           64
CC-BY
                  -




              CC-BY-SA

09   12   6              65
CC-BY     CC-BY-ND
                 -


              CC-BY-SA

09   12   6                         66
CC-BY   CC-BY-ND
                -




              CC-BY-SA CC-BY-NC

09   12   6                       67
CC0
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09   12   6                69
UniProt


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              http://www.uniprot.org/help/license
09   12   6  ...
CC-BY-NC




09   12   6              71
PLoS Comp. Biol.




                          CC-BY

09   12   6                       72
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09   12   6                         73
DBCLS

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09   12   6              74
09   12   6   75
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09   12   6             ...
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09   12   6                          ...
09   12   6   78
09   12   6   79
09   12   6   80
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09   12   6          81
09   12   6   82
09   12   6   83
09   12   6   84
09   12   6   85
09   12   6   86
09   12   6   87
09   12   6   88
09   12   6   89
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09   12   6          90
09   12   6   91
09   12   6   92
09   12   6   93
UniProt   P16033




09   12   6                      94
PubMed   2499875




09   12   6                      95
09   12   6   96
ID


09   12   6        97
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               TogoWS.DBCLS.jp

09   12   6                      98
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09   12   6                       ...
http://togows.dbcls.jp/entry/pubmed/2499875

               PubMed           2499875




09   12   6                      ...
API



09   12   6         101
URI



09   12   6         102
09   12   6   103
09   12   6   104
tp://togows.dbcls.jp/entry/pubmed/2499875/au




09   12   6                                    105
tp://togows.dbcls.jp/entry/pubmed/2499875/au


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09   12   6               ...
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09   12   6   106
09   12   6   107
URI, REST, XML, HTTP,
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09   12   6                           108
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09   12   6         109
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09   12   6   111
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09   12   6                        112
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09   12   6   114
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09   12   6                      115
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09   12   6                    ...
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09   12   6         117
09   12   6   118
09   12   6   119
09   12   6   120
09   12   6   121
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09   12   6                             122
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              •

09   12   6          ...
09   12   6   124
•

              •
              •


09   12   6       125
• TogoWS
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              •
09   12   6               126
MIT
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09   12   6                                   127
galaxycast.org

09   12   6                    128
10


                                    SNPs
              10

                   galaxycast.org

09   12   6            ...
•

              • Galaxycast.org
              • TogoTV.dbcls.jp
              •

09   12   6                       130
17:10


09   12   6           131
09   12   6   132
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              allie.dbcls.jp



09   12   6                            133
09   12   6   134
09   12   6   135
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09   12   6                       136
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09   12   6                        137
be associated




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09   12   6                        138
be associated



                                   be associated with   8
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PubMed/MEDLINE




09   12   6                    140
09   12   6   141
09   12   6   142
OpenID.dbcls.jp



09   12   6                     143
OpenID.dbcls.jp
              •

              •
              •
              • OpenID 1.0   2.0


09   12   6           ...
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≠

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ライフサイエンス統合データベースの課題:権利と法律、技術

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中尾光輝「ライフサイエンス統合データベースの課題:権利と法律、技術」CBRCワークショップII, Bioinformatics Week in Odaiba 2009

http://www.cbrc.jp/cbrc2009/cbrcws2_abstract.html#ws2-1

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ライフサイエンス統合データベースの課題:権利と法律、技術

  1. 1. 09 12 6 1
  2. 2. 09 12 6 2
  3. 3. 09 12 6 3
  4. 4. DDBJ 1,000 1 http://www.ddbj.nig.ac.jp/images/breakdown_stats/DBGrowth-e.gif 09 12 6 4
  5. 5. 20000000.00 15000000.00 10000000.00 1,900 5000000.00 0 1965 1969 1973 1977 1981 1985 1989 1993 1997 2001 2005 2009 http://www.nlm.nih.gov/bsd/index_stats_comp.html 09 12 6 5
  6. 6. 10,000 300 2,000 09 12 6 6
  7. 7. 09 12 6 7
  8. 8. 09 12 6 8
  9. 9. 09 12 6 9
  10. 10. 09 12 6 10
  11. 11. 09 12 6 11
  12. 12. → 09 12 6 12
  13. 13. 09 12 6 13
  14. 14. 09 12 6 14
  15. 15. 09 12 6 15
  16. 16. 09 12 6 16
  17. 17. 09 12 6 17
  18. 18. 09 12 6 18
  19. 19. 09 12 6 19
  20. 20. 09 12 6 20
  21. 21. ≠ 09 12 6 21
  22. 22. 09 12 6 22
  23. 23. 09 12 6 23
  24. 24. 09 12 6 24
  25. 25. 09 12 6 25
  26. 26. H19 DBCLS 09 12 6 26
  27. 27. 09 12 6 27
  28. 28. LifeScienceDB.jp 09 12 6 28
  29. 29. 09 12 6 29
  30. 30. 09 12 6 30
  31. 31. 09 12 6 31
  32. 32. 09 12 6 32
  33. 33. 09 12 6 33
  34. 34. 3D 09 12 6 34
  35. 35. 09 12 6 35
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  48. 48. 09 12 6 48
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  50. 50. 09 12 6 50
  51. 51. • • • 09 12 6 51
  52. 52. 09 12 6 52
  53. 53. 09 12 6 53
  54. 54. 09 12 6 54
  55. 55. 09 12 6 55
  56. 56. 09 12 6 56
  57. 57. 09 12 6 57
  58. 58. 09 12 6 58
  59. 59. 09 12 6 59
  60. 60. 09 12 6 60
  61. 61. 09 12 6 61
  62. 62. 09 12 6 62
  63. 63. 09 12 6 63
  64. 64. CC-BY 09 12 6 64
  65. 65. CC-BY - CC-BY-SA 09 12 6 65
  66. 66. CC-BY CC-BY-ND - CC-BY-SA 09 12 6 66
  67. 67. CC-BY CC-BY-ND - CC-BY-SA CC-BY-NC 09 12 6 67
  68. 68. CC0 CC-BY CC-BY-SA CC-BY-ND CC-BY-NC CC-BY-SA-ND CC-BY-SA-NC CC-BY-SA-ND-NC 09 12 6 68
  69. 69. All rights Reserved 09 12 6 69
  70. 70. UniProt CC-BY-ND http://www.uniprot.org/help/license 09 12 6 70
  71. 71. CC-BY-NC 09 12 6 71
  72. 72. PLoS Comp. Biol. CC-BY 09 12 6 72
  73. 73. PersonalGenomes.org CC ZERO 09 12 6 73
  74. 74. DBCLS CC-BY-SA 09 12 6 74
  75. 75. 09 12 6 75
  76. 76. • • • et. al., • CC-BY 09 12 6 76
  77. 77. • PubMed GenBank • • CC0 09 12 6 77
  78. 78. 09 12 6 78
  79. 79. 09 12 6 79
  80. 80. 09 12 6 80
  81. 81. 1734 09 12 6 81
  82. 82. 09 12 6 82
  83. 83. 09 12 6 83
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  85. 85. 09 12 6 85
  86. 86. 09 12 6 86
  87. 87. 09 12 6 87
  88. 88. 09 12 6 88
  89. 89. 09 12 6 89
  90. 90. OPCD 09 12 6 90
  91. 91. 09 12 6 91
  92. 92. 09 12 6 92
  93. 93. 09 12 6 93
  94. 94. UniProt P16033 09 12 6 94
  95. 95. PubMed 2499875 09 12 6 95
  96. 96. 09 12 6 96
  97. 97. ID 09 12 6 97
  98. 98. TogoWS REST TogoWS.DBCLS.jp 09 12 6 98
  99. 99. http://togows.dbcls.jp/entry/uniprot/P16033 UniProt P16033 09 12 6 99
  100. 100. http://togows.dbcls.jp/entry/pubmed/2499875 PubMed 2499875 09 12 6 100
  101. 101. API 09 12 6 101
  102. 102. URI 09 12 6 102
  103. 103. 09 12 6 103
  104. 104. 09 12 6 104
  105. 105. tp://togows.dbcls.jp/entry/pubmed/2499875/au 09 12 6 105
  106. 106. tp://togows.dbcls.jp/entry/pubmed/2499875/au tp://togows.dbcls.jp/entry/pubmed/2499875/ti 09 12 6 105
  107. 107. tp://togows.dbcls.jp/entry/pubmed/2499875/au tp://togows.dbcls.jp/entry/pubmed/2499875/ti tp://togows.dbcls.jp/entry/pubmed/2499875/so 09 12 6 105
  108. 108. tp://togows.dbcls.jp/entry/pubmed/2499875/au tp://togows.dbcls.jp/entry/pubmed/2499875/ti tp://togows.dbcls.jp/entry/pubmed/2499875/so tp://togows.dbcls.jp/entry/pubmed/2499875/mesh 09 12 6 105
  109. 109. 09 12 6 106
  110. 110. 09 12 6 107
  111. 111. URI, REST, XML, HTTP, SOAP, RDF, OWL,... 09 12 6 108
  112. 112. W3C 09 12 6 109
  113. 113. UniProt • 2006-2007 • • RDF • 09 12 6 110
  114. 114. 09 12 6 111
  115. 115. DBCLS BioHackathon 09 12 6 112
  116. 116. 2008 Web Service Infrastructure for Interoperability User and Data Oriented Integration 2009 generated by wordle.net 09 12 6 113
  117. 117. 09 12 6 114
  118. 118. DDBJ, PDBj, KEGG 09 12 6 115
  119. 119. DBCLS BioHackathon 2010 2010/02/08-12 DBCLS and CBRC 09 12 6 116
  120. 120. RDF 09 12 6 117
  121. 121. 09 12 6 118
  122. 122. 09 12 6 119
  123. 123. 09 12 6 120
  124. 124. 09 12 6 121
  125. 125. Galaxy galaxy.dbcls.jp preview.galaxy.dbcls.jp 09 12 6 122
  126. 126. • • UCSC BioMart • NMD • • 09 12 6 123
  127. 127. 09 12 6 124
  128. 128. • • • 09 12 6 125
  129. 129. • TogoWS • MEDLINE • PNE • OReFiL • 09 12 6 126
  130. 130. MIT github.com/dbcls/dbcls-galaxy 09 12 6 127
  131. 131. galaxycast.org 09 12 6 128
  132. 132. 10 SNPs 10 galaxycast.org 09 12 6 129
  133. 133. • • Galaxycast.org • TogoTV.dbcls.jp • 09 12 6 130
  134. 134. 17:10 09 12 6 131
  135. 135. 09 12 6 132
  136. 136. Allie allie.dbcls.jp 09 12 6 133
  137. 137. 09 12 6 134
  138. 138. 09 12 6 135
  139. 139. Long form (abbr.) 09 12 6 136
  140. 140. InMeXes docman.dbcls.jp/im 09 12 6 137
  141. 141. be associated be 09 12 6 138
  142. 142. be associated be associated with 8 to be associated 4 may be associated 3 be can be associated 5 09 12 6 139
  143. 143. PubMed/MEDLINE 09 12 6 140
  144. 144. 09 12 6 141
  145. 145. 09 12 6 142
  146. 146. OpenID.dbcls.jp 09 12 6 143
  147. 147. OpenID.dbcls.jp • • • • OpenID 1.0 2.0 09 12 6 144
  148. 148. 09 12 6 145
  149. 149. 09 12 6 146
  150. 150. 09 12 6 147
  151. 151. 09 12 6 148
  152. 152. ≠ 09 12 6 149
  153. 153. 09 12 6 150
  154. 154. 09 12 6 151
  155. 155. 09 12 6 152
  156. 156. 09 12 6 153
  157. 157. 09 12 6 154
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