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Principal Solutions Architect, MongoDB
Asya Kamsky
@MongoDB @asya999 #askAsya
Diagnostics and Debugging
Principal Solutions Architect, MongoDB
Asya Kamsky
#MongoDB @asya999 #askAsya
Diagnostics and Debugging
Understanding Crime Scene
Understanding Crime Scene
“Data! Data! Data! 
I can't make bricks without clay.”
-- Sherlock Holmes, 
The Adventure of the Copper Beeches
10
Gathering Data
“It is a capital mistake to
theorize before one has data.
Insensibly one begins to twist
facts to suit theories, instead 
of theories to suit facts.”
-- Sherlock Holmes, A Scandal in Bohemia
12
“There is nothing like first-hand evidence.”
-- Sherlock Holmes, A Study in Scarlet
Available Tools: OS
% iostat
% free
% blockdev--report
% dmesg
% ulimit-a
% ifconfig,ip <...>,iptables
% top, ...
Available Tools:
Available Tools: OS for MongoDB
% mongostat
% mongotop
Available Tools: MongoDB shell
% mongostat
% mongotop
> db.currentOp( ),db.serverStatus( )
> rs.status( )
> sh.status( )
Available Tools:
% mongostat
% mongotop
> db.currentOp( ),db.serverStatus( )
> rs.status( )
> sh.status( )
MongoDB Management Service (MMS)
Monitoring
Available Tools:
Available Tools:
Available Tools:
MongoDB Management Service (MMS)
Monitoring
Available Tools:
mongod logs
mongod logs
Tue Jul 30 19:15:27.898 [conn2] query
test.docs query: { query: { _id: { $gt:
ObjectId('51da44a8a4435e3d7174b696') }
}, orderby: { ts: 1.0 } } ntoreturn:10
ntoskip:0 nscanned:9235093
scanAndOrder:1 keyUpdates:0 numYields:5
locks(micros) r:6919962 nreturned:1
reslen:360 3578ms
mongod logs
mongod logs
"It is of the highest importance ... to be able to
recognize, out of a number of facts, which
are incidental and which vital. "
Sherlock Holmes, The Reigate Puzzle
https://github.com/rueckstiess/mtools
by Thomas Rückstieß
mtools
•  mloginfo
•  mlogfilter
•  mplotqueries
•  mlogvis
•  mlaunch
mtools
•  mloginfo
•  mlogfilter
•  mplotqueries
mloginfo
source: logs/mongodb.log.2014-05-04T15-52-59
start: 2014 May 02 00:29:21
end: 2014 May 04 15:52:59
date format: iso8601-local
length: 17091234
binary: mongod
version: 2.6.0
------------------------------------------
source: logs/mongodb.log.2014-05-04T15-53-06
start: 2014 May 02 00:29:25
end: 2014 May 04 15:53:06
date format: iso8601-local
length: 13696471
binary: mongod
version: 2.6.0
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
mplotqueries
$ mplotqueries --help
usage: mplotqueries [OPTIONS] [logfile [logfile ...]]
A script to plot various information from logfiles. ...
optional arguments:
--type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event}
type of plot (default=scatter with --yaxis duration)
--group GROUP specify value to group on.
All basic plot types can group on
'namespace', 'operation', 'thread', 'pattern' ...
"... what is out of the common is usually a guide
rather than a hindrance."
— Sherlock Holmes, A Study in Scarlet
The Adventure of the Missing
Three-Quarter (Indexes)
$ mloginfo firstmongo.log
source: firstmongo.log
start: 2014 Jun 10 11:19:54
end: 2014 Jun 17 17:14:15
date format: iso8601-local
length: 14170668
binary: mongod
version: 2.6.1
mloginfo firstmongo.log --queries
mloginfo
$ mloginfo firstmongo.log
source: firstmongo.log
start: 2014 Jun 10 11:19:54
end: 2014 Jun 17 17:14:15
date format: iso8601-local
length: 14170668
binary: mongod
version: 2.6.1
mloginfo firstmongo.log –-queries
namespace pattern count max (ms) mean (ms) 95%-ile (ms) sum (ms)
db1.request {"requestSender": 1} 29 350161 93828 339441.2 2721018
db1.request {"curRoute": 1,"isAdv": 1 } 169 9585 3942 6324.2 666302
db1.report {"deliveryTime": 1} 9 111421 71536 106609.4 643829
db2.report {"deliveryTime": 1} 10 85267 60363 81508.15 603634
db3.report {"deliveryTime": 1} 10 72071 53062 70781.3 530624
db1.pending {"sentTime": 1, "status": 1} 9 108734 38013 88470.4 342117
mloginfo
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte:
"2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects:
5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte:
"2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects:
5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte:
"2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects:
5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte:
"2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects:
5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
2014-06-17T17:13:47.607 [conn1569990] query db2.coll query: { time: { $lt: "2014-06-17 17:14:05", $gte:
"2014-06-17 17:05:05" }, status: 8 } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:2057564
nscannedObjects:2057564 keyUpdates:0 numYields:5008 locks(micros) r:11557172 nreturned:56 reslen:18745
13086ms
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte:
"2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects:
5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
2014-06-17T17:13:47.607 [conn1569990] query db2.coll query: { time: { $lt: "2014-06-17 17:14:05", $gte:
"2014-06-17 17:05:05" }, status: 8 } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:2057564
nscannedObjects:2057564 keyUpdates:0 numYields:5008 locks(micros) r:11557172 nreturned:56 reslen:18745
13086ms
mplotqueries
% mplotqueries firstmongo.log --type nscanned/n
2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte:
"2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects:
5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
2014-06-17T17:13:47.607 [conn1569990] query db2.coll query: { time: { $lt: "2014-06-17 17:14:05", $gte:
"2014-06-17 17:05:05" }, status: 8 } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:2057564
nscannedObjects:2057564 keyUpdates:0 numYields:5008 locks(micros) r:11557172 nreturned:56 reslen:18745
13086ms
The Sign of Four (Shards)
% mplotqueries updates?.log
% mplotqueries updates?.log
% mplotqueries updates?.log
% mplotqueries updates?.log
% mplotqueries updates?.log
63
"Eliminate all other factors, and the 
one which remains must be the truth."

Sherlock Holmes -The Sign of Four
The Case of Identity
% mplotqueries –type histogram –group namespace –bucketSize 3600
The Stockbroker's Clerk's Query
% mplotqueries –type connchurn
"We balance probabilities and
choose the most likely. It is the
scientific use of the imagination."
Sherlock Holmes,The Houndof the Baskervilles
With profoundthanks to:
Sir Arthur Conan Doyle (1859-1930)
MongoDB, Inc.
Asya Kamsky
#MongoDB @asya999 #askAsya
Thank You
http://askasya.com/
http://www.kamsky.org/

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Diagnostics & Debugging webinar

  • 1. Principal Solutions Architect, MongoDB Asya Kamsky @MongoDB @asya999 #askAsya Diagnostics and Debugging
  • 2. Principal Solutions Architect, MongoDB Asya Kamsky #MongoDB @asya999 #askAsya Diagnostics and Debugging
  • 3.
  • 4.
  • 5.
  • 6.
  • 9.
  • 10. “Data! Data! Data! I can't make bricks without clay.” -- Sherlock Holmes, The Adventure of the Copper Beeches 10
  • 12. “It is a capital mistake to theorize before one has data. Insensibly one begins to twist facts to suit theories, instead of theories to suit facts.” -- Sherlock Holmes, A Scandal in Bohemia 12
  • 13.
  • 14. “There is nothing like first-hand evidence.” -- Sherlock Holmes, A Study in Scarlet
  • 15. Available Tools: OS % iostat % free % blockdev--report % dmesg % ulimit-a % ifconfig,ip <...>,iptables % top, ...
  • 17. Available Tools: OS for MongoDB % mongostat % mongotop
  • 18. Available Tools: MongoDB shell % mongostat % mongotop > db.currentOp( ),db.serverStatus( ) > rs.status( ) > sh.status( )
  • 19. Available Tools: % mongostat % mongotop > db.currentOp( ),db.serverStatus( ) > rs.status( ) > sh.status( ) MongoDB Management Service (MMS) Monitoring
  • 22. Available Tools: MongoDB Management Service (MMS) Monitoring
  • 25. mongod logs Tue Jul 30 19:15:27.898 [conn2] query test.docs query: { query: { _id: { $gt: ObjectId('51da44a8a4435e3d7174b696') } }, orderby: { ts: 1.0 } } ntoreturn:10 ntoskip:0 nscanned:9235093 scanAndOrder:1 keyUpdates:0 numYields:5 locks(micros) r:6919962 nreturned:1 reslen:360 3578ms
  • 28. "It is of the highest importance ... to be able to recognize, out of a number of facts, which are incidental and which vital. " Sherlock Holmes, The Reigate Puzzle
  • 29.
  • 30.
  • 32. mtools •  mloginfo •  mlogfilter •  mplotqueries •  mlogvis •  mlaunch
  • 34. mloginfo source: logs/mongodb.log.2014-05-04T15-52-59 start: 2014 May 02 00:29:21 end: 2014 May 04 15:52:59 date format: iso8601-local length: 17091234 binary: mongod version: 2.6.0 ------------------------------------------ source: logs/mongodb.log.2014-05-04T15-53-06 start: 2014 May 02 00:29:25 end: 2014 May 04 15:53:06 date format: iso8601-local length: 13696471 binary: mongod version: 2.6.0
  • 35. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ...
  • 36. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration)
  • 37. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration)
  • 38. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration)
  • 39. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration)
  • 40. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration)
  • 41. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration)
  • 42. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration)
  • 43. mplotqueries $ mplotqueries --help usage: mplotqueries [OPTIONS] [logfile [logfile ...]] A script to plot various information from logfiles. ... optional arguments: --type {nscanned/n,rsstate,connchurn,durline,histogram,range,scatter,event} type of plot (default=scatter with --yaxis duration) --group GROUP specify value to group on. All basic plot types can group on 'namespace', 'operation', 'thread', 'pattern' ...
  • 44.
  • 45. "... what is out of the common is usually a guide rather than a hindrance." — Sherlock Holmes, A Study in Scarlet
  • 46. The Adventure of the Missing Three-Quarter (Indexes)
  • 47. $ mloginfo firstmongo.log source: firstmongo.log start: 2014 Jun 10 11:19:54 end: 2014 Jun 17 17:14:15 date format: iso8601-local length: 14170668 binary: mongod version: 2.6.1 mloginfo firstmongo.log --queries mloginfo
  • 48. $ mloginfo firstmongo.log source: firstmongo.log start: 2014 Jun 10 11:19:54 end: 2014 Jun 17 17:14:15 date format: iso8601-local length: 14170668 binary: mongod version: 2.6.1 mloginfo firstmongo.log –-queries namespace pattern count max (ms) mean (ms) 95%-ile (ms) sum (ms) db1.request {"requestSender": 1} 29 350161 93828 339441.2 2721018 db1.request {"curRoute": 1,"isAdv": 1 } 169 9585 3942 6324.2 666302 db1.report {"deliveryTime": 1} 9 111421 71536 106609.4 643829 db2.report {"deliveryTime": 1} 10 85267 60363 81508.15 603634 db3.report {"deliveryTime": 1} 10 72071 53062 70781.3 530624 db1.pending {"sentTime": 1, "status": 1} 9 108734 38013 88470.4 342117 mloginfo
  • 51. mplotqueries % mplotqueries firstmongo.log --type nscanned/n 2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte: "2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects: 5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
  • 52. mplotqueries % mplotqueries firstmongo.log --type nscanned/n 2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte: "2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects: 5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
  • 53. mplotqueries % mplotqueries firstmongo.log --type nscanned/n 2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte: "2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects: 5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms
  • 54. mplotqueries % mplotqueries firstmongo.log --type nscanned/n 2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte: "2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects: 5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms 2014-06-17T17:13:47.607 [conn1569990] query db2.coll query: { time: { $lt: "2014-06-17 17:14:05", $gte: "2014-06-17 17:05:05" }, status: 8 } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:2057564 nscannedObjects:2057564 keyUpdates:0 numYields:5008 locks(micros) r:11557172 nreturned:56 reslen:18745 13086ms
  • 55. mplotqueries % mplotqueries firstmongo.log --type nscanned/n 2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte: "2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects: 5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms 2014-06-17T17:13:47.607 [conn1569990] query db2.coll query: { time: { $lt: "2014-06-17 17:14:05", $gte: "2014-06-17 17:05:05" }, status: 8 } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:2057564 nscannedObjects:2057564 keyUpdates:0 numYields:5008 locks(micros) r:11557172 nreturned:56 reslen:18745 13086ms
  • 56. mplotqueries % mplotqueries firstmongo.log --type nscanned/n 2014-06-17T17:13:34.235 [conn1569841] query db1.coll query: { time: { $lt: "2014-06-17 17:13:31", $gte: "2014-06-17 17:04:31" } } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:5169727 nscannedObjects: 5169727 keyUpdates:0 numYields:12492 locks(micros) r:37736571 nreturned:72 reslen:32707 30129ms 2014-06-17T17:13:47.607 [conn1569990] query db2.coll query: { time: { $lt: "2014-06-17 17:14:05", $gte: "2014-06-17 17:05:05" }, status: 8 } planSummary: COLLSCAN ntoreturn:0 ntoskip:0 nscanned:2057564 nscannedObjects:2057564 keyUpdates:0 numYields:5008 locks(micros) r:11557172 nreturned:56 reslen:18745 13086ms
  • 57. The Sign of Four (Shards)
  • 63. 63 "Eliminate all other factors, and the one which remains must be the truth." Sherlock Holmes -The Sign of Four
  • 64. The Case of Identity
  • 65.
  • 66.
  • 67.
  • 68. % mplotqueries –type histogram –group namespace –bucketSize 3600
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  • 88.
  • 89.
  • 90. "We balance probabilities and choose the most likely. It is the scientific use of the imagination." Sherlock Holmes,The Houndof the Baskervilles With profoundthanks to: Sir Arthur Conan Doyle (1859-1930)
  • 91. MongoDB, Inc. Asya Kamsky #MongoDB @asya999 #askAsya Thank You http://askasya.com/ http://www.kamsky.org/