Jeremy Miller1,2
, Donat Agosti2,3
, Guido Sautter2
, Terry Catapano2,4
,
David King5
, Serrano Pereira1
, Rutger Vos1
, S...
Records: 230,000,000
Species: 165,000
Species occurrence data in GBIF: Animals
GBIF Records Species in GBIF
Plants
Birds
Hymenoptera
Spiders
Other
Plants
Birds
Hymenoptera
Spiders
animals
Other
animals...
Moritz, C., K.S. Richardson, S. Ferrier, G.B. Monteith, J. Stanisic, S.E. Williams, T. Whiffin. 2001. Biogeographical conc...
Number of Collection Records in
Physical Versus Digital Form, by Collection
Number of Collection Records in
Physical Versus Digital Form, by Collection
Number of Collection Records in
Physical Versus Digital Form, by Collection
Drawings: slavenapeneva.com
Collect specimens
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Make Observations
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Analyze Data and Write Manuscript
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Analyze Data and Write Manuscript
Primary Data
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Primary Data
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Primary Data
Thanks: Lyubomir Penev
Cybertaxonomic
Publication Venue
Drawings: slavenapeneva.com
Primary Data
Thanks: Lyubomir Penev
Cybertaxonomic
Publication Venue
Drawings: slavenapeneva.com
Primary Data
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Primary Data
Traditional
Publication Venue
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Primary Data
Traditional
Publication VenuePDF Prison
Thanks: Lyubomir Penev
Drawings: slavenapeneva.com
Primary Data
Traditional
Publication VenuePDF Prison
GoldenGATE XML Markup Editor
TaxonX XML S...
Drawings: slavenapeneva.com
Primary Data
Traditional
Publication Venue
Thanks: Lyubomir Penev
pro-iBiosphere spider pilot
12,000 Taxonomic Papers on Spiders
Since 1757
pro-iBiosphere spider pilot
34 (~7%)
~500
Countries (Region)
Australia (Queensland)
Export species materials citations (DwC)
PUBLISHED BY
Plazi.org taxonomic treatments
database
pro-iBiosphere spider pilot
5170 specimens
4062 plottable specimens from
1138 unique locations
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmei
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmei
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Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmei

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Unlocking the Legacy: The untapped value of data in taxonomic literature
Jeremy Miller, Donat Agosti, Guido Sautter Terry Catapano, David King, Serrano Pereira, Rutger Vos, Soraya Sierra
pro-iBiosphere final conference, 12 June 2014, Bouchart Castle, Meise, Belgium

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Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmei

  1. 1. Jeremy Miller1,2 , Donat Agosti2,3 , Guido Sautter2 , Terry Catapano2,4 , David King5 , Serrano Pereira1 , Rutger Vos1 , Soraya Sierra1 Unlocking the Legacy The Untapped Value of Data in Taxonomic Literature 1. Naturalis Biodiveristy Center, Leiden, Netherlands; 2. Plazi, Zinggstrasse 16, Bern, Switzerland; 3. Naturhistorisches Museum, Bern, Switzerland; 4. Columbia University, New York, United States of America; 5. The Open University, Milton Keynes, United Kingdom Report from the pro-iBiosphere Spider Pilot and data visualization hackathon
  2. 2. Records: 230,000,000 Species: 165,000 Species occurrence data in GBIF: Animals
  3. 3. GBIF Records Species in GBIF Plants Birds Hymenoptera Spiders Other Plants Birds Hymenoptera Spiders animals Other animals %DescribedspeciesinGBIF Species occurrence data in GBIF
  4. 4. Moritz, C., K.S. Richardson, S. Ferrier, G.B. Monteith, J. Stanisic, S.E. Williams, T. Whiffin. 2001. Biogeographical concordance and efficiency of taxon indicators for establishing conservation priority in a tropical rainforest biota. Proceedings of the Royal Society, London, Series B 268: 1875-1881. Insects Snails and Insects •strong predictors of conservation priorities for vertebrates, but not vice versa •have finer-scale distribution patterns and higher local endemicity than vertebrates and plants Snails Vertebrates Lauraceae Snails Vertebrates Lauraceae Insects Vertebrates Lauraceae Insects Snails Vertebrates Insects Snails Lauraceae Testing surrogates to establish conservation priorities Value of species occurrence data
  5. 5. Number of Collection Records in Physical Versus Digital Form, by Collection
  6. 6. Number of Collection Records in Physical Versus Digital Form, by Collection
  7. 7. Number of Collection Records in Physical Versus Digital Form, by Collection
  8. 8. Drawings: slavenapeneva.com Collect specimens Thanks: Lyubomir Penev
  9. 9. Drawings: slavenapeneva.com Make Observations Thanks: Lyubomir Penev
  10. 10. Drawings: slavenapeneva.com Analyze Data and Write Manuscript Thanks: Lyubomir Penev
  11. 11. Drawings: slavenapeneva.com Analyze Data and Write Manuscript Primary Data Thanks: Lyubomir Penev
  12. 12. Drawings: slavenapeneva.com Primary Data Thanks: Lyubomir Penev
  13. 13. Drawings: slavenapeneva.com Primary Data Thanks: Lyubomir Penev
  14. 14. Cybertaxonomic Publication Venue Drawings: slavenapeneva.com Primary Data Thanks: Lyubomir Penev
  15. 15. Cybertaxonomic Publication Venue Drawings: slavenapeneva.com Primary Data Thanks: Lyubomir Penev
  16. 16. Drawings: slavenapeneva.com Primary Data Traditional Publication Venue Thanks: Lyubomir Penev
  17. 17. Drawings: slavenapeneva.com Primary Data Traditional Publication VenuePDF Prison Thanks: Lyubomir Penev
  18. 18. Drawings: slavenapeneva.com Primary Data Traditional Publication VenuePDF Prison GoldenGATE XML Markup Editor TaxonX XML Schema Thanks: Lyubomir Penev
  19. 19. Drawings: slavenapeneva.com Primary Data Traditional Publication Venue Thanks: Lyubomir Penev
  20. 20. pro-iBiosphere spider pilot 12,000 Taxonomic Papers on Spiders Since 1757
  21. 21. pro-iBiosphere spider pilot 34 (~7%) ~500
  22. 22. Countries (Region) Australia (Queensland) Export species materials citations (DwC)
  23. 23. PUBLISHED BY Plazi.org taxonomic treatments database
  24. 24. pro-iBiosphere spider pilot 5170 specimens 4062 plottable specimens from 1138 unique locations

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