You may use (single) sequences or (single) gene names , GenBank accessions , protein domains ("SH3"), protein motifs ("SEQ:KDEL"), protein localization ("endoplasmic reticulum"), literature , authors ("Straussberg").
You may also combine searches simply by entering multiple words (enable the checkbox " AND ").
By default: “ OR ".
Queries Type brca1 DNA binding 17q21 the ring-type zinc finger domain interacts with bap1 plasma membrane occurs in hemizygous males brain malformation Cloning and expression of a human CDC42 Barfold highly expressed in heart automatic–manual annotation author paper title disease‐related information disease‐related information Localization protein domains chromosomal location molecular function gene name and aliases Example Query
The second output is generated when one of the hits in the list is opened.
Then the results of all different databases corresponding to one single gene / protein are displayed in one single HTML page.
Similar to the Google “ page-rank ”.
The Second Output displays the sum of all word scores C : number of different search words on the page S : total number of word hits on the page a short feature summary of the protein a short feature summary of the protein
Score Score : the number of occurrences of the word on this page divided by the total number of occurrences on all pages in the index *100000 (for readability)
Score (113/2626)*100000 =4303 score Score : the number of occurrences of the word on this page divided by the total number of occurrences on all pages in the index *100000 (for readability)