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Scipy, numpy and friends
 

Scipy, numpy and friends

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Just a very quick intro to Numpy and friends.

Just a very quick intro to Numpy and friends.
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    Scipy, numpy and friends Scipy, numpy and friends Presentation Transcript

    • Scipy, Numpy and friends.Michele Mattioni - mattioni@ebi.ac.ukCompNeur group.http://www.ebi.ac.uk/~mattioni/pylab_pres/orhttps://github.com/mattions/pylab_pres EBI is an Outstation of the European Molecular Biology Laboratory.
    • Scipy, Numpy and friends by Michele Mattioni is licensed under CC BY-NC-SA 3.0.Permissions beyond the scope of this license may be available at https://github.com/mattions.
    • Go here:http://www.ebi.ac.uk/~mattioni/pylab_pres/ or https://github.com/mattions/pylab_pres
    • Scipy and Numpy - http://www.scipy.org Data structure for mathematical operation Collections of high level with speed in mind. mathematical operations: - regression - interpolation - optimization - integration
    • Matplotlib - http://matplotlib.sourceforge.net/ - Display and plot you data quickly - Different kind of plot available
    • Ipython - http://ipython.scipy.org - Enhanced python console - Trials and errors encouraged - Quick access to the help.
    • Plot of an exponential function
    • Difference between Console and Script Console Program - Quick to write - Slower to write - Messy to maintain - Easier to maintain
    • HELP! Different ways to access help:Console: name_of_the _function?Online: http://docs.scipy.org/doc/Suggested:Tutorial http://www.scipy.org/Tentative_NumPy_Tutorial
    • Numpy array
    • Plotting
    • Importing your data and visualize them
    • Fitting the data