Phylotastic presentation - Harmon

arbor: Enabling tree-thinking at broad spatial and temporal scalesMonday, June 4, 12

arbor Application and GUI logic VisualizationMonday, June 4, 12

arbor • Visual, extensible software • Load your data or use web services Application and GUI logic • Use visual workﬂow interface to Interactively build models • Scale analyses to very large trees Visualization • Interact with cross-linked data • Format and export resultsMonday, June 4, 12

this software will allow you to:Monday, June 4, 12

this software will allow you to: test key evolutionary hypotheses with methods that are new and ﬂexible using massive amounts of dataMonday, June 4, 12

visual interfaceMonday, June 4, 12

Figure 2. Web services in phyloFlow. phyloFlow will combine local computation with remote access to data, computation, and archiving.Monday, June 4, 12

A Sample of arbor models Varies on a birth-death Constraints branch Species Varies across Brownian motion interactions clades Varies through Mk model Sudden jumps timeMonday, June 4, 12

test case: grasslandsMonday, June 4, 12

Figure 4. Proposed phyloFlow work<low for Test Case 1. Information processing <lows from remote sources to <ive phyloFlow modules. First, the dataIntegrator (A) combines phylogenetic, distributional, and climactic data sources. openModeller (B) then creates species distribution models, and Lagrange (C) tests historical biogeographic hypotheses incorporating those models. Next, phyloView allows geographic (D) and phylogenetic (E) visualization of results. Outputs are directed to the dataOutput module (F), which can save results both locally and remotely.Monday, June 4, 12

Monday, June 4, 12

How do species interactions shape long-term patterns of evolution?Monday, June 4, 12

How do species interactions Can we predict the genome shape long-term patterns of structure of extinct taxa? evolution?Monday, June 4, 12

How do species interactions Can we predict the genome shape long-term patterns of structure of extinct taxa? evolution? Why are some parts of the tree of life so much more diverse than others?Monday, June 4, 12

How do species interactions Can we predict the genome shape long-term patterns of structure of extinct taxa? evolution? Why are some parts of the (your question here) tree of life so much more diverse than others?Monday, June 4, 12

Phylotastic presentation - Harmon

by Luke Harmon

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