"The Reality of Digital Science"
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"The Reality of Digital Science" Presentation Transcript

  • 1. the reality of ‘digital science’ kaitlin thaney SciPy, 13 july 2011 austin, texasWednesday, 13 July 2011
  • 2. xi. backgroundWednesday, 13 July 2011
  • 3. about meWednesday, 13 July 2011
  • 4. Digital Science (the company)Wednesday, 13 July 2011
  • 5. investment arm incubator role in-house devWednesday, 13 July 2011
  • 6. tiered approach build to scale researcher-focusedWednesday, 13 July 2011
  • 7. 1. science, tech, and moving onlineWednesday, 13 July 2011
  • 8. Wednesday, 13 July 2011
  • 9. Wednesday, 13 July 2011
  • 10. research idea lit review publish discovery share results materials retest analyze experiment collect dataWednesday, 13 July 2011
  • 11. blocking points (to name a few ... ) idea lit review publish discovery share results materials retest analyze experiment collect dataWednesday, 13 July 2011
  • 12. access analysis disseminationWednesday, 13 July 2011
  • 13. text text textWednesday, 13 July 2011
  • 14. discovery & deliveryWednesday, 13 July 2011
  • 15. changes at the workbenchWednesday, 13 July 2011
  • 16. annotation & curationWednesday, 13 July 2011
  • 17. social & administrativeWednesday, 13 July 2011
  • 18. gaps still existWednesday, 13 July 2011
  • 19. 2. key constituenciesWednesday, 13 July 2011
  • 20. (3)Wednesday, 13 July 2011
  • 21. machines researchers decision makersWednesday, 13 July 2011
  • 22. machines researchers decision makersWednesday, 13 July 2011
  • 23. ... annotation markup search discovery “behind the scenes” ...Wednesday, 13 July 2011
  • 24. [brief interlude]Wednesday, 13 July 2011
  • 25. digitisation of the scholarly canon (content is still king)Wednesday, 13 July 2011
  • 26. Wednesday, 13 July 2011
  • 27. Wednesday, 13 July 2011
  • 28. not nearly there yet ...Wednesday, 13 July 2011
  • 29. Wednesday, 13 July 2011
  • 30. barriers to “access”Wednesday, 13 July 2011
  • 31. still the starting pointWednesday, 13 July 2011
  • 32. patents are no better (in many cases, worse)Wednesday, 13 July 2011
  • 33. Wednesday, 13 July 2011
  • 34. Wednesday, 13 July 2011
  • 35. Wednesday, 13 July 2011
  • 36. Wednesday, 13 July 2011
  • 37. Wednesday, 13 July 2011
  • 38. can streamlineWednesday, 13 July 2011
  • 39. name disambiguationWednesday, 13 July 2011
  • 40. 10,11-dihydro-5-methyl-5H-dibenzo[b,e][1,4]diazepin-11-one (still strains the minds of the best)Wednesday, 13 July 2011
  • 41. machine readability is key. agreement is hard.Wednesday, 13 July 2011
  • 42. 10,11-dihydro-5-methyl-5H-dibenzo[b,e][1,4]diazepin-11-oneWednesday, 13 July 2011
  • 43. “everything is metadata ... everything can be a label.” - david weinbergerWednesday, 13 July 2011
  • 44. Wednesday, 13 July 2011
  • 45. Wednesday, 13 July 2011
  • 46. Wednesday, 13 July 2011
  • 47. machines researchers decision makersWednesday, 13 July 2011
  • 48. a few edge cases (though no field is perfect)Wednesday, 13 July 2011
  • 49. Wednesday, 13 July 2011
  • 50. Wednesday, 13 July 2011
  • 51. CC-BY-2.0 - Plaxco Lab - http://www.flickr.com/photos/34857812@N04/Wednesday, 13 July 2011
  • 52. Wednesday, 13 July 2011
  • 53. tracking expiration calibrationWednesday, 13 July 2011
  • 54. ordering + processing the non-digitalWednesday, 13 July 2011
  • 55. protocols parameters calibration misc. litWednesday, 13 July 2011
  • 56. managing information different types of “data”Wednesday, 13 July 2011
  • 57. often gigabytes, not terabytesWednesday, 13 July 2011
  • 58. “i invented a folder based system ...”Wednesday, 13 July 2011
  • 59. “i invented a folder based system ...” “yeah, we had a LIMS. it only ever got used to store photos from lab nights out.”Wednesday, 13 July 2011
  • 60. Wednesday, 13 July 2011
  • 61. why? experimentation reliance data moves, grows legs funder/instit’n pressureWednesday, 13 July 2011
  • 62. Wednesday, 13 July 2011
  • 63. Wednesday, 13 July 2011
  • 64. Wednesday, 13 July 2011
  • 65. Wednesday, 13 July 2011
  • 66. machines researchers decision makersWednesday, 13 July 2011
  • 67. rewards, incentives the “ why ”Wednesday, 13 July 2011
  • 68. data capture (of a different sort)Wednesday, 13 July 2011
  • 69. the “social issue” best practices behaviour roadblocks discipline / researcher specificWednesday, 13 July 2011
  • 70. paper’s still the currencyWednesday, 13 July 2011
  • 71. imperfect systemWednesday, 13 July 2011
  • 72. “Right now were going through a Cambrian explosion of metrics.” - Johan Bollen Nature 465, 864-866 (2010) | doi:10.1038/465864aWednesday, 13 July 2011
  • 73. there’s been a drastic spike in terms of sheer volume and typeWednesday, 13 July 2011
  • 74. citation / impact factor h - index weighted citations (eigenfactor, sjr) “betweenness centrality” alt-metrics, etc.Wednesday, 13 July 2011
  • 75. difficult to ... harmonise track /maintain / map understand (even still measure)Wednesday, 13 July 2011
  • 76. administrators / funders = part of the research cycleWednesday, 13 July 2011
  • 77. Wednesday, 13 July 2011
  • 78. Wednesday, 13 July 2011
  • 79. Wednesday, 13 July 2011
  • 80. 3. the realityWednesday, 13 July 2011
  • 81. “the future is here ... just not evenly distributed yet.” - William GibsonWednesday, 13 July 2011
  • 82. changing understandings, paradigmsWednesday, 13 July 2011
  • 83. technology can help design decisions are key plan for the irrationalWednesday, 13 July 2011
  • 84. more efficient research increase productivity enable reproducibilityWednesday, 13 July 2011
  • 85. thank you. k.thaney@digital-science.com www.digital-science.com @kaythaneyWednesday, 13 July 2011