We will demonstrate a biological application of the ‘Adaptive Information Disclosure Application’ toolbox, a toolbox that is of general purpose, but can be used for specific applications, such as life science.
with AIDA Biological knowledge extraction for a Virtual Laboratory for e-Science ( Bio AID ) Marco Roos , Scott Marshall, Sophia Katrenko, Edgar Meij, Willem van Hage, Pieter Adriaans AIDA demonstration Uk-AHM, Nottingham, September 10, 2007
Biomedical knowledge repository 08/06/09 BioAID PubMed statistics http://www.ncbi.nlm.nih.gov/entrez >17 million citations >400,000 added/year ~70,000 searches/month … Does not compute Does not fit
Text mining 08/06/09 BioAID Biology Customized or personalized experiment Extracted knowledge I want to do it my way, use my models Carole Goble’s me -scientist
Bioinformatics and e-science 08/06/09 BioAID Single purpose, black box application Customized experiments with reusable components My component Your component My component Your component My component
The AIDA toolbox for knowledge extraction and knowledge management in a Virtual Laboratory for e-Science
Components of the AIDA toolbox used for Life Science knowledge extraction