My Project

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My Project

  1. 1. 광우병에서
구글까지
  2. 2. 전문가가 되어버리다
  3. 3. M/M Methionine=Met , Valine = Val
  4. 4. 영국인 은 한국 사람은
  5. 5. gtg/atg
  6. 6. dbSNP
  7. 7. 단지 하나 차이일뿐인데
  8. 8. 단일염기 다형성 (SNP, Single Nucleotide Polymorphism)
  9. 9. 23 99.9%
  10. 10. 44% 22% 19% 56% 1%
  11. 11. 30
  12. 12. 인간 유전체 연구
  13. 13. ...
  14. 14. 점점 커져가는데
  15. 15. 생물학 데이터에 대해서
  16. 16. 유전체 연구
  17. 17. GeneBank Cluster SWISS-PROT Super Computer Hardware Database Biomedical text analysis Information Retrieval Genomic Variation Research Sequence alignment Algorithm Machine Learning Classfication Personalized Clustering Pattern recognition Agent Medicine Information filtering Monitoring agent Personal Genome IT
  18. 18. Machine Learning Toby Segaran Biotech software company
  19. 19. Sequence Search with MPI
  20. 20. GPU
  21. 21. (Taverna, Myexperiment)
  22. 22. (Folding@Home, Korea@Home)
  23. 23. - foldit
  24. 24. (FreeBase)
  25. 25. Multidimensional Scaling(MDS) (CEU), (YRI), (JPT), (CHB)
  26. 26. KSNP(Korean SNP) Browser
  27. 27. Genome Browser with Google Maps API
  28. 28. BioBlogRSS:
  29. 29. !
  30. 30. 32 Node X86 18 Node IA2 Cluster Cluster NAS, DAS Storage Workstation 100 Node PPC Cluster
  31. 31. 해결 해야 할 문제점
  32. 32. ...ATTAGGACCAATAAGTCT... Person 1 + ...ATTAGGAGCAATAAGTCT... ...ATTAGGAGCAATAACTCT... Person 2 - ...ATTAGGAGCAATAAGTCT... 0.5M SNP, cohort of 5K individuals, 10k random data set Text Single locus Pair of locii (+,-) (+,-) Cost = 0.5M x 5k x 10k Cost = 1/2 x 0.5M x 0.5M x 5k x 10k 1 day 120 yr Computational problem
  33. 33. 구글과 생명 공학의 만남
  34. 34. Google Health BETA
  35. 35. SNP
  36. 36. ?
  37. 37. ?
  38. 38. 원하는것은
  39. 39. 4.*(#/,'(5 Hong ChangBum Center for Genome Science NIH, KCDC !quot;0*$1,.23quot;' hongiiv@gmail.com !quot;#quot;$%"'()*&$+,-.#/,'( !quot;#$%&'()*!'+,-.#& http://socmaster.homelinux.org/~hongiiv /++0122quot;3#4-!'5*quot;#$%&'(-(*+

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