Linux Cluster and Distributed Resource Manager

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Linux Cluster and Distributed Resource Manager using Shell Script

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Linux Cluster and Distributed Resource Manager

  1. 1. Linux Cluster and Distributed Resource Manager Center for Genome Science, NIH, KCDC Hong Chang Bum hongiiv@gmail.com
  2. 2. Linux Cluster • 3 Linux Cluster Machine • KHAN • KGENE • BIO
  3. 3. KHAN • Total 94 Nodes (1 Master + 94 work Node) • 64Bit PowerPC 720 4-way, 16GB RAM • 64Bit PowerPC 770 2-way, 2GB RAM • User Space: /home1 1.6TB • Scratch Space: /home2/scratch 935GB • Software: /home1/biosoftware • EIGNSTRAT, merlin, phase, plink, R ...
  4. 4. DRM • Distribute Resource Manager • Job Scheduler • IBM LoadLeveler, PBS, OpenPBS, Torqueue, Grid Engine, Sun Grid Engine(SGE), LSF • Job Distribute, Job Status, Queue status, Node Status, User Accounting

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