Genomics & Epigenomics

764 views

Published on

Published in: Education, Technology
0 Comments
0 Likes
Statistics
Notes
  • Be the first to comment

  • Be the first to like this

No Downloads
Views
Total views
764
On SlideShare
0
From Embeds
0
Number of Embeds
2
Actions
Shares
0
Downloads
9
Comments
0
Likes
0
Embeds 0
No embeds

No notes for slide

Genomics & Epigenomics

  1. 1. Genomics and Epigenomics Shared Resource (GESR) Habtom Ressom, PhD Director Catalin Marian, MD, PhD Director David Goerlitz, MS Manager Xiaojun Zou, MS Research Associate Md Islam, MD Research Associate Xin (James) Li, MS Bioinformatician
  2. 2. GESR New Service <ul><li>Quantitative DNA Methylation Analysis </li></ul><ul><li>by Pyrosequencing </li></ul><ul><li>CpG methylation analysis at gene promoter levels </li></ul><ul><li>CpG methylation of LINE elements to estimate global genomic DNA methylation </li></ul>For more details visit http://lombardi.georgetown.edu/research/sharedresources/gesr
  3. 3. GESR New Service <ul><li>Custom Low- to Mid-Plex SNP Genotyping </li></ul><ul><li>The Illumina GoldenGate Genotyping Assay allows you to create your own custom panels to interrogate 48-, 96-, 144-, 192-, and 384-plex SNP loci/sample in 96 samples simultaneously. </li></ul><ul><li>This assay utilizes the Illumina BeadXpress platform. </li></ul>For more details visit http://lombardi.georgetown.edu/research/sharedresources/gesr/
  4. 4. GESR New Service Microarrays <ul><li>SNP and CNV Analysis: </li></ul><ul><li>New Affymetrix Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers </li></ul><ul><li>Includes more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. </li></ul>For more details visit http://lombardi.georgetown.edu/research/sharedresources/gesr/
  5. 5. GESR New Service <ul><li>Microarrays </li></ul><ul><li>Whole Transcriptome Expression Analysis: </li></ul><ul><li>Each of 28,869 genes on the </li></ul><ul><li>GeneChip® Human Gene 1.0 ST </li></ul><ul><li>Array is represented on the array by approximately 26 probes spread </li></ul><ul><li>across the full length of the gene </li></ul><ul><li>Provides more complete and more accurate picture of gene expression than 3’ based expression array designs. </li></ul>For more details visit http://lombardi.georgetown.edu/research/sharedresources/gesr/
  6. 6. GESR New Services MICRO RNA PROFILING <ul><li>miRNA analysis using the Applied Biosystems TaqMan® Human MicroRNA Array Set. </li></ul><ul><li>Set enables accurate measurement of all mature human miRNAs in various biospecimens, including FFPE tissue and liquid samples </li></ul>For more details visit http://lombardi.georgetown.edu/research/sharedresources/gesr/
  7. 7. Contact Information: <ul><li>Directors: </li></ul><ul><li>Habtom Ressom, PhD, Telephone: (202) 687-2283, [email_address] </li></ul><ul><li>Catalin Marian, MD, PhD, Telephone: (202) 687-4438, [email_address] </li></ul><ul><li>Manager: </li></ul><ul><li>David Goerlitz, MS, Telephone: (202) 687-0832, [email_address] </li></ul><ul><li>Research Associates: </li></ul><ul><li>Xiaojun Zou, MS, Telephone: (202) 687-7776, [email_address] </li></ul><ul><li>Md Islam, MD, Telephone: (202) 687-7776, [email_address] </li></ul><ul><li>Bioinformatician: </li></ul><ul><li>Xin (James) Li, MS, Telephone: (202) 687-8533, [email_address] </li></ul>
  8. 8. Shared Resources are partially supported by the Georgetown Howard University Center for Clinical and Translational Studies (GHUCCTS) 1UL1RR031975-01    In your publications, remember to mention support provided from the GHUCCTS.

×