JISC MRD workshop Birmingham march 2011
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JISC MRD workshop Birmingham march 2011 Presentation Transcript

  • 1. G. A. Thorisson, University of Leicester ORCID and JISC MRD projects identifying knowledge contributors Gudmundur ‘Mummi’ Thorisson <gt50@le.ac.uk> Department of Genetics, University of Leicester ORCID - http://www.orcid.org GEN2PHEN - http://www.gen2phen.org -- Outline -- • Self-intro - who am I and how did I get here? • ORCID - tackling the author/contributor identification challenge • Opportunities for JISC MRD (and related) projects This work can be freely copied, redistributed and adapted, as long as proper attribution is given JISC Managing Research Data workshop 28-29 March 2011 1Tuesday, 29 March 2011
  • 2. Tuesday, 29 March 2011
  • 3. G. A. Thorisson, University of Leicester JISC Managing Research Data workshop 28-29 March 2011 3Tuesday, 29 March 2011
  • 4. G. A. Thorisson, University of Leicester JISC Managing Research Data workshop 28-29 March 2011 3Tuesday, 29 March 2011
  • 5. G. A. Thorisson, University of Leicester The data sharing problem JISC Managing Research Data workshop 28-29 March 2011 4Tuesday, 29 March 2011
  • 6. G. A. Thorisson, University of Leicester Lack of incentives for sharing • Effort required to prepare, package and submit datasets to public repositories • Time better spent writing papers & grants • All sticks (funders, journals) - no carrots • Need incentives - treat data as publications “[...] Many of the issues regarding data availability can be addressed if the principles of “publication” rather than “sharing” are applied. However, online data publication systems also need to develop mechanisms for data citation and indices of data access comparable to those for citation systems in print journals” Costello, M. Motivating Online Publication of Data. BioScience (2009) vol. 59 (5) pp. 418-427 JISC Managing Research Data workshop 28-29 March 2011 5Tuesday, 29 March 2011
  • 7. G. A. Thorisson, University of Leicester Challenges in attributing content creators -the ‘author name problem’- How about these? JISC Managing Research Data workshop 28-29 March 2011 6Tuesday, 29 March 2011
  • 8. G. A. Thorisson, University of Leicester Challenges in attributing content creators -the ‘author name problem’- How about these? Or these? J. Smith Are these authors all the same person? J. SmithG. Thorisson, University of Leicester J. SmithG. A. Thorisson, University of Leicester J. SmithG. A. Thorisson, Cold Spring Harbor Laboratory J. Smith [etc.] ∼2/3 of the ∼6 million authors in MEDLINE share a last name and first initial with at least one other author, and an ambiguous name refers to ∼8 persons on average. Torvik and Smalheiser. Author name disambiguation in MEDLINE. ACM Transactions on Knowledge Discovery from Data (2009) vol. 3 (3) JISC Managing Research Data workshop 28-29 March 2011 6Tuesday, 29 March 2011
  • 9. G. A. Thorisson, University of Leicester Need to IDENTIFY people as they contribute to & access Internet resources• The basic identity problem the Internet poses is establishing one party’s identity to another party’s satisfaction through communication across the network. Weitzner. In Search of Manageable Identity Systems. IEEE Internet Computing (2006) vol. 10 (6) pp. 84-86 JISC Managing Research Data workshop 28-29 March 2011 7Tuesday, 29 March 2011
  • 10. G. A. Thorisson, University of Leicester Need to IDENTIFY people as they contribute to & access Internet resources• The basic identity problem the Internet poses is establishing one party’s identity to another party’s satisfaction through communication across the network. Weitzner. In Search of Manageable Identity Systems. IEEE Internet Computing (2006) vol. 10 (6) pp. 84-86 JISC Managing Research Data workshop 28-29 March 2011 7Tuesday, 29 March 2011
  • 11. G. A. Thorisson, University of Leicester ORCID - tackling the contributor identification problem ? ORCID ORCID ID: B-1242-2010 F67572010 G. Thorisson, Univ. Leicester G. A. Thorisson, Univ. Leicester G. A. Thorisson, Cold Spring Harbor Lab. ORCID ID: G-1442-2009 J. Smith, Univ. North Pole ORCID ID: D-2400-2010 J. Smith, Luthor Corporation Global registry of disambiguated IDs for contributors: i) researchers to manage & use their ORCID ID ii) linking content creators with their work (attribution links) iii) interact with other systems (publishers, digital libraries, universities etc) JISC Managing Research Data workshop 28-29 March 2011 8Tuesday, 29 March 2011
  • 12. G. A. Thorisson, University of Leicester Key use case: submitting manuscript to journal Attribution deposited into ORCID: • A-883-2010 <created> 10.4259/psycho-review.gbilder2010.Foobar JISC Managing Research Data workshop 28-29 March 2011Tuesday, 29 March 2011
  • 13. G. A. Thorisson, University of Leicester JISC Managing Research Data workshop 28-29 March 2011 10Tuesday, 29 March 2011
  • 14. G. A. Thorisson, University of Leicester tio ns ni za Or ga >2 00 JISC Managing Research Data workshop 28-29 March 2011 10Tuesday, 29 March 2011
  • 15. G. A. Thorisson, University of Leicester ORCID Principles - http://orcid.org/principles1. ORCID will work to support the creation of a permanent, clear and unambiguous record of scholarly communication by enabling reliable attribution of authors and contributors.2. ORCID will transcend discipline, geographic, national and institutional, boundaries.3. Participation in ORCID is open to any organization that has an interest in scholarly communications.4. Access to ORCID services will be based on transparent and non-discriminatory terms posted on the ORCID website.5. Researchers will be able to create, edit, and maintain an ORCID ID and profile free of charge.6. Researchers will control the defined privacy settings of their own ORCID profile data.7. All profile data contributed to ORCID by researchers or claimed by them will be available in standard formats for free download (subject to the researchers own privacy settings) that is updated once a year and released under the CC0 waiver.8. All software developed by ORCID will be publicly released under an Open Source Software license approved by the Open Source Initiative. For the software it adopts, ORCID will prefer Open Source.9. ORCID identifiers and profile data (subject to privacy settings) will be made available via a combination of no charge and for a fee APIs and services. Any fees will be set to ensure the sustainability of ORCID as a not-for-profit, charitable organization focused on the long-term persistence of the ORCID system.10. ORCID will be governed by representatives from a broad cross-section of stakeholders, the majority of whom are not-for-profit, and will strive for maximal transparency by publicly posting summaries of all board meetings and annual financial reports. JISC Managing Research Data workshop 28-29 March 2011 11Tuesday, 29 March 2011
  • 16. G. A. Thorisson, University of Leicester GET INVOLVED! • Organizations register as participants • Attend upcoming ORCID Participant meetings – May 17 @Harvard, USA - focus on data publication and citation (see http:/orcid.org) • NB follows Data Citation Principles workshop May 16, also @Harvard – September @CERN, Switzerland • Participate in community discussion – Community forum - http://groups.google.com/group/orcid-researchers/ JISC Managing Research Data workshop 28-29 March 2011 12Tuesday, 29 March 2011
  • 17. G. A. Thorisson, University of Leicester ORCID collaborative development JISC Managing Research Data workshop 28-29 March 2011 13Tuesday, 29 March 2011
  • 18. G. A. Thorisson, University of Leicester ORCID collaborative development JISC Managing Research Data workshop 28-29 March 2011 13Tuesday, 29 March 2011
  • 19. G. A. Thorisson, University of Leicester Attributing other types of ‘published work’ G. Thorisson, Univ. Leicester gthorisson@gmail.com ORCID ID: A-883-2010 • Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010). Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. doi:10.4259/psycho.5gtpq-thorisson JISC Managing Research Data workshop 28-29 March 2011 14Tuesday, 29 March 2011
  • 20. G. A. Thorisson, University of Leicester Attributing other types of ‘published work’ G. Thorisson, Univ. Leicester gthorisson@gmail.com ORCID ID: A-883-2010 • Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010). Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. doi:10.4259/psycho.5gtpq-thorisson • A-883-2010 <created> 10.4259/psycho-image5gtpq-thorisson • C-035-2009 <created> 10.4259/psycho-image5gtpq-thorisson • A-101-2010 <created> 10.4259/psycho-image5gtpq-thorisson JISC Managing Research Data workshop 28-29 March 2011 14Tuesday, 29 March 2011
  • 21. G. A. Thorisson, University of Leicester Attributing other types of ‘published work’ • Datasets in Dryad • Knowledge Blog contributions • SageCite workflows in myExperiment • XYZ project G. Thorisson, Univ. Leicester – [insert favorite JISC MRD project!] gthorisson@gmail.com ORCID ID: A-883-2010 • Managing/maintaining digital bio- resources • Value-add curation activities • [...etc] • A-883-2010 <created> [globally-unique identifier for the work] JISC Managing Research Data workshop 28-29 March 2011Tuesday, 29 March 2011
  • 22. G. A. Thorisson, University of Leicester Attributing other types of ‘published work’ • Datasets in Dryad • Knowledge Blog contributions • SageCite workflows in myExperiment • XYZ project G. Thorisson, Univ. Leicester – [insert favorite JISC MRD project!] gthorisson@gmail.com ORCID ID: A-883-2010 • Managing/maintaining digital bio- resources • Value-add curation activities • [...etc] • A-883-2010 <created> [globally-unique identifier for the work] JISC Managing Research Data workshop 28-29 March 2011Tuesday, 29 March 2011
  • 23. G. A. Thorisson, University of Leicester • Who contributed to dataset 10.4259/psycho.5gtpq-thorisson? • All data publications by A-883-2010 ? G. Thorisson, Univ. Leicester • Which papers have cited the works of A-883-2010 ? gthorisson@gmail.com ORCID ID: A-883-2010 • Total no. citations to datasets by A-883-2010 in the last 2 years? • Total no. downloads of datasets by A-883-2010? • [...] JISC Managing Research Data workshop 28-29 March 2011 16Tuesday, 29 March 2011
  • 24. G. A. Thorisson, University of Leicester Current ORCID status & timeline • Alpha prototype – Running on a live website for limited testing • partial functionality - based on ResearcherID software – Development plan forthcoming in mid-April JISC Managing Research Data workshop 28-29 March 2011 17Tuesday, 29 March 2011
  • 25. G. A. Thorisson, University of Leicester Current ORCID status & timeline • Alpha prototype – Running on a live website for limited testing • partial functionality - based on ResearcherID software – Development plan forthcoming in mid-April • Rough timeframe for beta system: live late 2011 / early 2012 JISC Managing Research Data workshop 28-29 March 2011 17Tuesday, 29 March 2011
  • 26. G. A. Thorisson, University of Leicester ORCID & JISC MRD projects what can we do together? • Seeking early adopters / collaborators • Looking to collaborate with groups & projects – gather use cases => requirements for ORCID core system – joint fund-seeking to do pilot implementations • ORCID wants to do Linked Data – Aligning with SemWeb work being done in VIVO – Ontologies: characterize nature of citations (CiTO) and contributions (PRO)? • Unconference session in afternoon, non? JISC Managing Research Data workshop 28-29 March 2011 18Tuesday, 29 March 2011
  • 27. G. A. Thorisson, University of Leicester Coming autumn 2011, to a venue near you! Int’l workshop on researcher identity • Co-organized by CSC (Finland IT Centre for Science) • Provisional title: “Identity in research infrastructure and scientific communication" - IRISC • Location: Helsinki • Dates: September 12-13 JISC Managing Research Data workshop 28-29 March 2011 19Tuesday, 29 March 2011
  • 28. G. A. Thorisson, University of Leicester Acknowledgements GEN2PHEN Consortium This work has received funding from the European Communitys Seventh http://www.gen2phen.org/about-gen2phen/partners Framework Programme (FP7/2007-2013) under grant agreement number 200754 - the GEN2PHEN project. Anthony J. Brookes Bioinformatics Group Contact me! Gudmundur ‘Mummi’ Thorisson <gt50@le.ac.uk> |<gthorisson@gmail.com> http://friendfeed.com/mummi http://www.linkedin.com/in/mummi http://www.twitter.com/gthorisson JISC Managing Research Data workshop 28-29 March 2011 20Tuesday, 29 March 2011