Identity in research data publication - meeting with SageCite people march2011

817 views
761 views

Published on

0 Comments
1 Like
Statistics
Notes
  • Be the first to comment

No Downloads
Views
Total views
817
On SlideShare
0
From Embeds
0
Number of Embeds
2
Actions
Shares
0
Downloads
6
Comments
0
Likes
1
Embeds 0
No embeds

No notes for slide

Identity in research data publication - meeting with SageCite people march2011

  1. 1. G. A. Thorisson, University of Leicester Identity in research data publication Gudmundur ‘Mummi’ Thorisson <gt50@le.ac.uk> Brookes lab Identity Workshop prep-meeting, Helsinki, January 27 2011 1Tuesday, 22 March 2011
  2. 2. G. A. Thorisson, University of Leicester Non-unique names are a major problem in the scholarly literature Identity Workshop prep-meeting, Helsinki, January 27 2011 2Tuesday, 22 March 2011
  3. 3. G. A. Thorisson, University of Leicester Non-unique names are a major problem in the scholarly literature Are these authors all the same person?G. Thorisson, University of LeicesterG. A. Thorisson, University of LeicesterG. A. Thorisson, Cold Spring Harbor Laboratory Identity Workshop prep-meeting, Helsinki, January 27 2011 2Tuesday, 22 March 2011
  4. 4. G. A. Thorisson, University of Leicester Non-unique names are a major problem in the scholarly literature Or these? J. Smith Are these authors all the same person? J. SmithG. Thorisson, University of Leicester J. SmithG. A. Thorisson, University of Leicester J. SmithG. A. Thorisson, Cold Spring Harbor Laboratory J. Smith [etc.] Identity Workshop prep-meeting, Helsinki, January 27 2011 2Tuesday, 22 March 2011
  5. 5. G. A. Thorisson, University of Leicester Non-unique names are a major problem in the scholarly literature How about these? Or these? J. Smith Are these authors all the same person? J. SmithG. Thorisson, University of Leicester J. SmithG. A. Thorisson, University of Leicester J. SmithG. A. Thorisson, Cold Spring Harbor Laboratory J. Smith [etc.] Identity Workshop prep-meeting, Helsinki, January 27 2011 2Tuesday, 22 March 2011
  6. 6. G. A. Thorisson, University of Leicester Non-unique names are a major problem in the scholarly literature How about these? Or these? J. Smith Are these authors all the same person? J. SmithG. Thorisson, University of Leicester J. SmithG. A. Thorisson, University of Leicester J. SmithG. A. Thorisson, Cold Spring Harbor Laboratory J. Smith [etc.]∼2/3 of the ∼6 million authors in MEDLINE share a last name and firstinitial with at least one other author, and an ambiguous name refers to∼8 persons on average.Torvik and Smalheiser. Author name disambiguation in MEDLINE. ACM Transactions on KnowledgeDiscovery from Data (2009) vol. 3 (3) Identity Workshop prep-meeting, Helsinki, January 27 2011 2Tuesday, 22 March 2011
  7. 7. Tuesday, 22 March 2011
  8. 8. Tuesday, 22 March 2011
  9. 9. Tuesday, 22 March 2011
  10. 10. Tuesday, 22 March 2011
  11. 11. Tuesday, 22 March 2011
  12. 12. Tuesday, 22 March 2011
  13. 13. Tuesday, 22 March 2011
  14. 14. Tuesday, 22 March 2011
  15. 15. Tuesday, 22 March 2011
  16. 16. Tuesday, 22 March 2011
  17. 17. G. A. Thorisson, University of Leicester Geoffrey Bilder Director of Strategic Initiatives Identity Workshop prep-meeting, Helsinki, January 27 2011 5Tuesday, 22 March 2011
  18. 18. G. A. Thorisson, University of Leicester Identity Workshop prep-meeting, Helsinki, January 27 2011 6Tuesday, 22 March 2011
  19. 19. G. A. Thorisson, University of Leicester • Contributor recognition - attribute published works to the person(s) who contributed to them Identity Workshop prep-meeting, Helsinki, January 27 2011 7Tuesday, 22 March 2011
  20. 20. G. A. Thorisson, University of Leicester Unique identifiers for authors contributors Identity Workshop prep-meeting, Helsinki, January 27 2011 8Tuesday, 22 March 2011
  21. 21. G. A. Thorisson, University of Leicester Unique identifiers for authors contributors automated author disambiguation + author involvement Identity Workshop prep-meeting, Helsinki, January 27 2011 8Tuesday, 22 March 2011
  22. 22. G. A. Thorisson, University of Leicester Unique identifiers for authors contributors automated author disambiguation + author involvement Identity Workshop prep-meeting, Helsinki, January 27 2011 8Tuesday, 22 March 2011
  23. 23. G. A. Thorisson, University of Leicester Unique identifiers for authors contributors automated author disambiguation + author involvement Dec’09: launch of the Open Researcher Contributor Identification Initiative - ORCID Identity Workshop prep-meeting, Helsinki, January 27 2011 8Tuesday, 22 March 2011
  24. 24. G. A. Thorisson, University of Leicester ? ORCID ORCID ID: B-1242-2010 G. Thorisson, Univ. Leicester G. A. Thorisson, Univ. Leicester F67572010 G. A. Thorisson, Cold Spring Harbor Lab. ORCID ID: G-1442-2009 J. Smith, Univ. North Pole ORCID ID: D-2400-2010 J. Smith, Luthor Corporation Centrally-managed informatics infrastructure: i) for researchers to manage & use profile ii) for tracking author-to-publication attribution links iii) interaction with other systems (e.g. publishers, digital libraries Identity Workshop prep-meeting, Helsinki, January 27 2011 9Tuesday, 22 March 2011
  25. 25. G. A. Thorisson, University of Leicester Manuscript submission to journal Attribution: ORCID ID for author <--> DOI for article Identity Workshop prep-meeting, Helsinki, January 27 2011 10Tuesday, 22 March 2011
  26. 26. G. A. Thorisson, University of Leicester Why publishers want this – single sign-on (SSO) for manuscript tracking systems – Disambiguating contact information for use by editorial offices, royalty payments systems, copyright clearances, etc. – Automatic updating of email addresses for table of contents (TOC) alerts and other automated email communications – Automated tools for detecting potential reviewers, including tools for detecting potential conflicts of interest – Synchronization with publisher web site user profiles and granting researchers customized, privileged access to content based on profiles – Understanding all of the manifold ways in which an individual “contributes” to a publisher or a field (e.g. As an editor, reviewer, letter writer, conference chair, etc.). – Etc. Identity Workshop prep-meeting, Helsinki, January 27 2011 11Tuesday, 22 March 2011
  27. 27. G. A. Thorisson, University of Leicester Why researchers will want this -Verified publication record -streamlined MS submission -attribution for non-traditional scholarly output -Etc. Identity Workshop prep-meeting, Helsinki, January 27 2011 12Tuesday, 22 March 2011
  28. 28. G. A. Thorisson, University of Leicester www.gen2phen.org Identity Workshop prep-meeting, Helsinki, January 27 2011 13Tuesday, 22 March 2011
  29. 29. G. A. Thorisson, University of Leicester www.gen2phen.org t ions a nisa 0 Org >15 Identity Workshop prep-meeting, Helsinki, January 27 2011 13Tuesday, 22 March 2011
  30. 30. Tuesday, 22 March 2011
  31. 31. G. A. Thorisson, University of Leicester Research data as scholarly output • Provenance - I trust dataset X generated by a certain J. Smith • Contributor recognition - publication credit for sharing data Identity Workshop prep-meeting, Helsinki, January 27 2011 15Tuesday, 22 March 2011
  32. 32. G. A. Thorisson, University of Leicester Research data as scholarly output • Provenance - I trust dataset X generated by a certain J. Smith • Contributor recognition - publication credit for sharing data • Access management - control access to sensitive research data Identity Workshop prep-meeting, Helsinki, January 27 2011 15Tuesday, 22 March 2011
  33. 33. G. A. Thorisson, University of LeicesterNeed to IDENTIFY people as they contribute to & access Internet resources• The basic identity problem the Internet poses is establishing one party’s identity to another party’s satisfaction through communication across the network. Weitzner. In Search of Manageable Identity Systems. IEEE Internet Computing (2006) vol. 10 (6) pp. 84-86 Lab meeting Fri 11 Feb 2010 16Tuesday, 22 March 2011
  34. 34. G. A. Thorisson, University of LeicesterNeed to IDENTIFY people as they contribute to & access Internet resources• The basic identity problem the Internet poses is establishing one party’s identity to another party’s satisfaction through communication across the network. Weitzner. In Search of Manageable Identity Systems. IEEE Internet Computing (2006) vol. 10 (6) pp. 84-86 Lab meeting Fri 11 Feb 2010 16Tuesday, 22 March 2011
  35. 35. G. A. Thorisson www.gen2phen.org Data-related applications for an online digital identity (a.k.a ‘researcher IDs’) • Access management – Controlling access to non-public resources on the Web • Analytical resources - incl. high-performance computing clusters • Potentially identifiable biomedical data • Contribution tracking – Data submissions to central repositores – Data curation / micro-attribution – Bio-resource impact factor + nanopublications 3rd Human Variome Project Meeting, Paris, 10-14 May, 2010 17Tuesday, 22 March 2011
  36. 36. G. A. Thorisson, University of Leicester The data sharing problem From http://www.nature.com/news/specials/datasharing/ Identity Workshop prep-meeting, Helsinki, January 27 2011 18Tuesday, 22 March 2011
  37. 37. G. A. Thorisson, University of Leicester The data sharing problem Data analysed synthesised interpreted Information published From http://www.nature.com/news/specials/datasharing/ Knowledge Publication Identity Workshop prep-meeting, Helsinki, January 27 2011 18Tuesday, 22 March 2011
  38. 38. G. A. Thorisson, University of Leicester Publishing a journal article Identity Workshop prep-meeting, Helsinki, January 27 2011 19Tuesday, 22 March 2011
  39. 39. G. A. Thorisson, University of Leicester Publishing a journal article Publishing a dataset Identity Workshop prep-meeting, Helsinki, January 27 2011 19Tuesday, 22 March 2011
  40. 40. G. A. Thorisson, University of Leicester Outcome 3/3 DOI <-> ORCID ID • Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010). Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. doi:10.4259/psycho.5gtpq-thorisson Identity Workshop prep-meeting, Helsinki, January 27 2011 20Tuesday, 22 March 2011
  41. 41. G. A. Thorisson, University of Leicester Outcome 3/3 DOI <-> ORCID ID • Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010). Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. doi:10.4259/psycho.5gtpq-thorisson • A-883-2010 <created> 10.4259/psycho.5gtpq-thorisson • C-035-2009 <created> 10.4259/psycho.5gtpq-thorisson • A-101-2010 <created> 10.4259/psycho.5gtpq-thorisson Identity Workshop prep-meeting, Helsinki, January 27 2011 20Tuesday, 22 March 2011
  42. 42. G. A. Thorisson, University of Leicester Cafe RouGE 1. Diagnostic 2. Central 3. End-users (e.g. laboratories mutation depot LSDB curators) Publish data Retrieve RSS feeds •Digital IDs for security / access management •Attribution for published data, via digital IDs 10 Lab meeting Fri 11 Feb 2010 21Tuesday, 22 March 2011
  43. 43. G. A. Thorisson, University of Leicester • Who contributed to dataset 10.4259/psycho.5gtpq-thorisson? • All data publications by A-883-2010 ? G. Thorisson, Univ. Leicester • Which papers have cited the works of A-883-2010 ? gthorisson@gmail.com ORCID ID: A-883-2010 • Total no. citations to datasets by A-883-2010 in the last 2 years? • Total no. downloads of datasets by A-883-2010? • [....] Identity Workshop prep-meeting, Helsinki, January 27 2011 22Tuesday, 22 March 2011
  44. 44. G. A. Thorisson, University of Leicester A digital identity for researchers centred on scholarly profile? Identity Workshop prep-meeting, Helsinki, January 27 2011 23Tuesday, 22 March 2011
  45. 45. G. A. Thorisson, University of Leicester A digital identity for researchers centred on scholarly profile? ORCID ID: B-1242-2010 G. Thorisson, Univ. Leicester G. A. Thorisson, Univ. Leicester G. A. Thorisson, Cold Spring Harbor Lab. http://mummi.myopenid.com Identity Workshop prep-meeting, Helsinki, January 27 2011 23Tuesday, 22 March 2011
  46. 46. G. A. Thorisson, University of Leicester A digital identity for researchers centred on scholarly profile? ORCID ID: B-1242-2010 G. Thorisson, Univ. Leicester G. A. Thorisson, Univ. Leicester G. A. Thorisson, Cold Spring Harbor Lab. http://mummi.myopenid.com Identity Workshop prep-meeting, Helsinki, January 27 2011 23Tuesday, 22 March 2011
  47. 47. G. A. Thorisson, University of Leicester A digital identity for researchers centred on scholarly profile? ORCID ID: B-1242-2010 G. Thorisson, Univ. Leicester G. A. Thorisson, Univ. Leicester G. A. Thorisson, Cold Spring Harbor Lab. http://mummi.myopenid.com Identity Workshop prep-meeting, Helsinki, January 27 2011 23Tuesday, 22 March 2011
  48. 48. G. A. Thorisson, University of Leicester A digital identity for researchers centred on scholarly profile? ORCID ID: B-1242-2010 G. Thorisson, Univ. Leicester G. A. Thorisson, Univ. Leicester G. A. Thorisson, Cold Spring Harbor Lab. http://mummi.myopenid.com Identity Workshop prep-meeting, Helsinki, January 27 2011 23Tuesday, 22 March 2011
  49. 49. G. A. Thorisson, University of Leicester Coming autumn 2011, to a venue near you! Int’l workshop on researcher identity • Co-organized by CSC (Finland IT Centre for Science) • Provisional title: “Identity in research infrastructure and scientific communication" - IRISC • Location: Helsinki • Time: September 12-13 Lab meeting Fri 11 Feb 2010 24Tuesday, 22 March 2011
  50. 50. G. A. Thorisson, University of Leicester Acknowledgements This work has received funding from GEN2PHEN Consortium the European Communitys Seventh Framework Programme http://www.gen2phen.org/about-gen2phen/partners (FP7/2007-2013) under grant agreement number 200754 - the GEN2PHEN project. Anthony J. Brookes Bioinformatics Group Contact me! Gudmundur A. Thorisson <gt50@le.ac.uk> http://friendfeed.com/mummi http://www.linkedin.com/in/mummi Identity Workshop prep-meeting, Helsinki, January 27 2011 25Tuesday, 22 March 2011

×