Facilitating Standardization And Exchange Of Array Design 12 08 2004
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Facilitating Standardization And Exchange Of Array Design 12 08 2004

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Facilitating Standardization And Exchange Of Array Design 12 08 2004 Facilitating Standardization And Exchange Of Array Design 12 08 2004 Presentation Transcript

  • Facilitating Standardization and Exchange of Array Design MAGEML2ADF 12 th August 2004
  • ADF Converter Specification
    • ADF/MAGE-ML converter
    • Standalone application
    • Automatic curation
    • Error log for correction
    • focused on usual application case: G.E., C.G.H and ChIP.
  • Modules
    • Common tool module
      • File reader/writer
      • Configuration
      • Update
      • Logging
    • Checking module
    • Conversion module
      • MAGE identifier generator
  • The Checking module
    • File structure Definition in a XML file
      • DBTag – AccessionNumber
      • MGED ontology term
      • DocumentStructure.xsd
    • Started date: May 4th
    • Ending date : November 1th
      • Common modules
      • File checking
      • Currently : ADF to MAGE-ML conversion