The pig picture was on an old t-shirt that was found stuffed under something when we moved offices. I cut the pig out and put it in an 8 x 10 frame that we had. I took a picture of it with my cell phone and emailed it to myself. Then I inserted the picture into a blank powerpoint and VOILA - The French Pig. (Sandy Poremba) Do we know who the original artist was? (Stan) I think it was Jill Warvel - a programmer from here. (Sandy Poremba)
An Introduction to Clinical LOINC Stanley M. Huff, M.D. Intermountain Healthcare [email_address]
Outline for All Tutorials
LOINC Introduction and Foundation
Documents
Assessment Instruments and Survey Instruments
Radiology and Imaging
Outline
LOINC background and goals
LOINC structure and content
Clinical LOINC
Examples
Attachments
Context specific hierarchies
Collections
Important facts
LOINC 2.27 (June 2009) contains 55,056 codes
40,302 Lab LOINC codes
10,773 Clinical LOINC codes
1,354 Claims Attachment codes
2,629 Survey codes
LOINC is protected by copyright, but is licensed Free for Use
Download files and tools from Regenstrief Web Site
www.regenstrief.org/loinc/loinc.htm
Reference manual, submission database, RELMA
RELMA – a tool for mapping local codes to LOINC
Coverage
Laboratory LOINC
All laboratory categories including genetic testing , veterinary medicine testing
Clinical LOINC
Many routine measures, parts of H+P, EKG, Cardiac echoes, OB ultrasound, Nursing survey instruments, Much more
HIPAA attachments
(Content managed by HL7)
Survey Questions
Skilled nursing facility Minimum Data Set (MDS)
The Messaging Paradigm System A System B Trigger Event Network Order Result
HL7 Result Message (ORU) Segment Data Field MSH|^~&|||||19981105131523||ORU^R01| PID|||100928782^9^M11||Smith^John^J| OBR||||Z0063-0^BP^LN| OBX||CE|8361-4^POSITION^LN||SIT^Sitting| OBX||NM|8479-8^SBP^LN||138|mmHg| Component
OBX: a name-value pair approach A code that identifies the data in OBX-5 (Temp Reading) OBX||NM|11289-6^^LN||38|C^^ISO+|||||F Other data fields include: date of observation, identity of provider giving observation, normal ranges, abnormal flags Status A code that identifies the units of numerical data in OBX-5 A code that identifies the datatype of OBX-5 OBX-5: Data
OBX: with a coded value OBX||CE|883-9^ Blood Group ^LN||58460004^ Group O ^SCT| The code is from SNOMED The code is from LOINC OBX-5: Data A code for Group O A code that identifies the datatype as a coded element A code that identifies the data in OBX-5 (ABO Blood Group)
So we are all using HL7, what is the problem?
Site 1:
OBX|1|CE| SysBP ^ Systolic BP || 132 ||mmHg|
Site 2:
OBX|1|CE| SBP ^ Systolic BP || 132 ||mmHg|
Site 3:
OBX|1|CE| BP ^ Systolic BP || 132/70 ||mmHg|
You and I may know that these are similar results, but our computers will not.
Site 1:
OBX|1|CE| 8479-8 ^ SysBP ^ LN || 132 ||mmHg|
Site 2:
OBX|1|CE| 8479-8 ^ SBP ^ LN || 132 ||mmHg|
Site 3:
OBX|1|CE| 8479-8 ^ Systolic BP ^ LN || 132/70 ||mmHg|
The Goal Agree on a universal coding system for clinical observations.
How terminologies fit into the model
LOINC – attributes/observables
SNOMED CT – findings/values (mostly) and observables (some)
First Data Bank - values
RxNORM - values
Focus of LOINC
Value for ‘Observation Identifier’ (Seq. #3) of OBX
Or the name of the observation in other standards, such as ASTM or DICOM
Individual result names first, then panels
Panels are built based on the tests they contain
Panels can contain other panels
Name should facilitate automated or manual matching (fully specified)
Create local labels as needed
Standard LOINC short names
One common identifier for tests that are ‘clinically’ the same
Brief History of LOINC
Logical Observation Identifier Names and Codes
Organized by Clement McDonald, 1994
Supported by Regenstrief Institute and NLM
Create a universal language for observation identifiers
Laboratory observations were created first
Creation of clinical observations began in 1996
Approach
Collect result names and descriptions
IHC, VA, Regenstrief, Mayo Clinic, 3M, Vendors
Formulate a model to represent the individual pieces of information in the name
Avoid strategies that lead to “combinatorial explosion”
Create “fully specified names”
Adjust model as needed
Do any distinct entities have the same name?
Do any entities that are the same have different names?
Repeat the process until no more adjustments are needed
LOINC makes names for things in use
We do not make all possible permutations that the six axes would allow (no blind cross products)
We try to only make names and codes for things that are real (exist in someone’s system)
We do make names that allow both atomic (post coordinated) and molecular (pre coordinated) styles
Some people wish we would be more prescriptive
Name everything, let others dictate usage
We do object to violations of the HL7 model
No names that include post coordinated fields from other parts of the HL7 message (status, priority, user role)
Two LOINC committees
Laboratory LOINC
Clem McDonald, Chair
All aspects of tests/measurements done on specimens
Chemistry, Hematology, Microbiology, Histology, Cytology, etc.
Clinical LOINC
Stan Huff, Chair
All aspects of tests/measurements on a patient
Vital signs, Hemodynamic measurements, Physical findings, Radiology, Ultrasound, etc.
Both committees meet at least 2-3 times each year
Current and Former Clinical LOINC Members
James Barthel , Dean Bidgood, Bruce Bray, Bill Francis, Alan Golichowski, Daniel Vreeman, Karl Hammermeister, Anders Thurin, Barry Gordon, Warren Williams, James Campbell, Jim Cimino, Sue Bakken, Pat Wilson, Stan Huff, Doug Martin, Clem McDonald, Dan Pollock, Angelo Rossi Mori, Susan Matney, Jeff Suico, Wayne Tracy, Pavla Frazier, Pat Wilson, Lee Min Lau, Shawn Shakib, Bill Karitis, Thomas White, Steven Steindel, Elizabeth King, Loren Stevenson, Sundak Ganesan, Ted Klein, Vivian Auld
Clinical LOINC Subject Areas
Vital Signs
Hemodynamics
Fluid Intake/Output
Body Measurements
Operative Notes
Emergency Department
Respiratory Therapy
Documents (collections)
Standard survey instruments
EKG (ECG)
Cardiac Ultrasound
Obstetrical Ultrasound
Discharge Summary
History & Physical
Pathology Findings
Colonoscopy/Endoscopy
Radiology reports
Clinical Documents
Tumor Registry
LOINC Mascot
Outline
LOINC background and goals
LOINC structure and content
Clinical LOINC
Examples
Attachments
Context specific hierarchies
Collections
LOINC codes are created systematically using a six axis model
General Form of Clinical LOINC Names <component> : <property> : <timing> : <system> : <scale> : <method> The first 5 parts are mandatory, but method is optional. Subparts of the six axes are created as needed in specific subject areas. 8331-1 Body Temperature :TEMP :PT :MOUTH :QN
Attachment types ultimately selected for development and HIPAA recommendation:
Ambulance
Emergency Department
Rehabilitative Services
Lab Results
Medications
Clinical Notes
CDA: Semi- or fully-structured HIPAA Claims Attachments Autoadjudicate Provider Payer Transcription * Scanned Paper or Document Imaging * Level 3 CPR Image + XML Semistructured Structured and coded Specific XML forms *
Separate codes for: rtf, Word, pdf, scanned images?
Proposed stragegy
For individual measurements
Continue to create codes that distinguish between character identifiers, strings, codes, dates, numbers
Create generic parents as needed, relate parent to children using new hierarchies
For collections
Continue to distinguish panels (explicit list of contained elements) from documents (ill defined or vague contents)
For documents, do not make distinct names based on narrative, nominal, pdf, Word, scanned image
Use the same codes for orders as for results
Just a code for “hematocrit”, no code for “hematocrit order” or “hematocrit result”
Use context to complete the meaning
Literature References
McDonald CJ, Huff SM, etal. LOINC® a universal standard for identifying laboratory observations – a 5-year Update . Clinical Chemistry , 2003
Huff SM, Rocha RA, McDonald CJ, De Moor GJE, etal. Development of the LOINC ® (Logical Observation Identifier Names and Codes) Vocabulary. Journal of American Medical Informatics Association , 1998, 5:276-292.
Dolin RH, Huff SM, Rocha RA, Spackman KA, Campbell, KE. Evaluation of a “Lexically Assign, Logically Refine”Strategy for Semi-Automated Integration of Overlapping Terminologies. Journal of American Medical Informatics Association , 1998, 5 : 203-213.
Forrey AW, McDonald CJ, DeMoor G, Huff SM , Leavelle D, Leland Fiers DT, Charles L, Griffin B, Stalling F, Tullis A, Hutchins K, Baenziger J. Logical Observation Identifier Names and Codes (LOINC) Database: A public use set of codes and names for electronic reporting of clinical laboratory test results . Clinical Chemistry , 1995.
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