Lec04 pyruvate met


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Lec04 pyruvate met

  1. 1. Outline  Fate of pyruvate (summary)  Energy yield of glycolysis – Anaerobic – Aerobic  Details of the fates of pyruvate – Reduction of pyruvate to lactate – Oxidative decarboxylation of pyruvate to acetyl CoA – Carboxylation of pyruvate to oxaloacetate – Reduction of pyruvate to ethanol  Feeder pathways for glycolysis – Fructose – galactose
  2. 2. Fate of Pyruvate  Lactate dehydrogenase – RBC and during exercise – Reversible in liver – Location: cytoplasm  Pyruvate dehydrogenase – TPP, LA are cofactors – Source of AcetylCoA – Irreversible reaction – Location: Mitochondria  Ethanol synthesis – In yeast, some bacteria – Location cytoplasm
  3. 3. 1. Reduction of pyruvate to ethanol (microorganism)• It occurs by the 2 reactions shown below:
  4. 4. Pyruvatedecarboxylasemechanism
  5. 5. • There is no net oxidation-reduction in the conversion of Glc into Ethanol.• NAD+ is used first and made it later!
  6. 6. Active site ofAlcoholdehydrogenase
  7. 7.  Pyruvate decarboxylase is present in brewer’s and baker’s yeast. CO2 produced during alcohol fermentation is responsible for the characteristic carbonation of champagne. In baking, CO2 fermentation by pyruvate decarboxylase during fermentation of dough due to CO2 , dough rises. Alcohol dehydrogenase metabolizes alcohol. TPP carries “active aldehyde” groups The pyruvate decarboxylase reaction is the first reaction we see that TPP is involved. TPP  Vit B1. If B1 is not enough
  8. 8. More about TPP Beriberi: swelling, pain, paralysis, death TPP plays an important role in the cleavage of bonds adjacent to a carbonyl group such as the decarboxylation of alpha-ketoacids and in chemical rearrangements involving transfer of an activated aldehyde group from one C to another. The functional part of TPP is the thiazolium ring. The proton at C-2 of the ring is relatively acidic. Loss of this proton produces an active site in TPP. TPP is involved in the following reactions 1. Pyruvate decarboxylase 2. Pyruvate dehydrogenase 3. Alpha-ketoglutarate dehyrogenase 4. Transketolase
  9. 9. Microbial fermentation yield other end products of commercial value:  Lactate and ethanol are the common products of microbial fermentation  Not the only ones... – In 1910, Chaim Weizmann (first president of Israel) discovered a bacterium – Clostridium acetobutyricum ferments starch to butanol and acetone.  Here comes industrial fermentation, purpose is to make important products from readily available material (like starch) by using microorganism.
  10. 10. Oxidation of ethanol in humans Alcohol is a significant source of calories in many individuals. The metabolism of ethanol yields acetate by means of a pathway of 2 oxidation reactions. 1. Formation of acetaldehyde: – The first oxidation in the metabolism of ethanol occurs in the liver by alcohol dehydrogenase. – Some acetaldehyde is formed by a microsomal ethanol oxidizing system (MEOS) involving NADPH, O2 and cyt P450. 2. Formation of acetate: – Acetaldehyde is further oxidized to acetate by the enzyme aldehyde dehydrogenase.
  11. 11. Some information about alcoholism 90% people drink alcohol. 40-50% of male  have temporary alcohol-induced problems. 10% male and 3-5% female  have persistent alcohol related problems (alcoholism). Ethanol easily moves through cell membranes. 12 oz beer or 4 oz wine has 10 grams of ethanol 1 liter of wine  80 g ethanol.
  12. 12. More about alcohol It is a CNS depressant, decreases activity of neurons. It is absorbed in the mouth, esophagus, stomach, and large bowel with a major site of absorption is small intestine. The rate of absorption is increased with rapid gastric emptying, absence of proteins, fats, or carbohydrates. 2%-20% of ethanol is excreted directly through the lungs, urine and sweat. The rest is metabolized to acetoaldehyde. The clinical significance of acetaldehyde is not known, but accumulation in liver, brain, or other body tissues may cause organ damage.
  13. 13. 2. REDUCTION OF PYRUVATE TO LACTATE: Lactate formed by the action of lactate dehydrogenase is the final product of anaerobic glycolysis. In exercising skeletal muscle, NADH production (by glyceraldehyde3-P and by the 3 NAD-linked dehydrogenase reaction of the TCA cycle) exceeds the capacity of the respiratory chain, resulting in an increase in NADH/NAD that favors reduction of pyruvate to lactate. Therefore, during intense exercise, lactate accumulates in the muscle , pH decreases  resulting in cramps. Much of the lactate eventually diffuses from the muscle into the blood stream. The direction of lactate dehydrogenase reaction depends on the relative intracellular concentrations of pyruvate and lactate and on the ratio of NADH/NAD in the cell. When animal tissues can not be supplied with enough oxygen to support aerobic oxidation of pyruvate and NADH produced in glycolysis, NAD+ is regenerated from NADH by the reduction of pyruvate to lactate.
  14. 14. More about lactate formation Certain other tissues and cell types (such as retina, brain, and RBCs) produce lactate from pyruvate under aerobic conditions. Lactate is the major end-product of glycolysis in RBCs. In tissues such as the liver and heart, the ratio of NADH/NAD is lower than in exercising muscle. These tissues can oxidize lactate to pyruvate. The cycle of reactions that includes glucose  lactate in muscle and lactate  glucose in liver is called the Cori Cycle for Carl and Gerty Cori whose studies in the 1930s and 1940s clarified the pathway and its role.
  15. 15. 3. The oxidative decarboxylation of pyruvate: The oxidative decarboxylation of pyruvate by pyruvate dehydrogenase is an important pathway. Pyruvate + NAD+ CoA  Acetyl CoA +CO2 + NADH This goes to TCA cycle and will be discussed later.
  16. 16. ENERGY YIELD FOR GLYCOLYSIS A. ANAEROBIC GLYCOLYSIS: Overall reaction: Glucose + 2P + 2ADP  2 Lactate + 2ATP + 2H2O 1. A net of 2 mols of ATP is produced for each molecule of glc. 2. Anaerobic glycolysis, although releasing only a small fraction of the energy contained in the glucose molecule, is a valuable source of energy under the following conditions. – When oxygen is decreased such as during intense exercise – In tissues with few mitochondria – the kidney, RBCs, WBCs, retina, and brain. 3. In anaerobic glycolysis there is no net production or consumption of NADH. The NADH formed by glyceraldehyde 3-P dehydrogenase is used by lactate dehydrogenase to reduce pyruvate to lactate. Two trioses are produced for each glucose molecule.
  17. 17. ATP consumption and productionReaction Change in ATP per Glc consumed1. Glc-----> Glc-6-P …………..2. Fructose-6-P------->F1,6bisP ………….3. 1,3 bisPglycerate--------> 3-Phosphoglycerate ………….4. PEP---------> Pyruvate …………. Net: ………….
  18. 18. Formation and consumption of NADH in anaerobic glycolysis:Reaction change in NADH1. Glyceraldehyde 3P-----> 1,3 BisPglyceraldehyde ……………2. Pyruvate---------------> Lactate …………… Net NADH: ……………
  19. 19. Aerobic glycolysis:Overall reaction:Glc+ 2P + 2NAD+ + 2ADP  2 Pyruvate + 2ATP + 2NADH + 2H+ + H2O.1. The direct formation and consumption of ATP are the same as in anaerobic glycolysis, that is a net gain of 2ATP per molecule of glucose.2. 2 mols of NADH are produced per mol glucose. Ongoing aerobic glycolysis requires the oxidation of this NADH by the respiratory chain.
  20. 20. Formation of ATP in aerobic glycolysis Reaction Change in ATP/glc cons. Glc-------------> Pyruvate NADH--------> NAD+ Net ATP:
  21. 21. Other monosaccarides can enter the glycolytic pathwayFructose must be phosphorylated to enter glycolysis.2 enzymes are responsible for this step.a. Hexokinase has a low affinity for fructose (high Km). Unless fructose levels of the body increases, little fructose is converted to fructose-6-P by this enzyme. D-fructose (present in fruits) or hydrolysis of sucrose can be phosphorylated by hexokinase to F-6-P. Sucrose + H2O  Fructose + Glucose Fructose + ATP  F-6-P + ADPIn muscle and kidney, this is a major pathway.
  22. 22. Second enzymeb. By fructokinase:The liver (which processes much of the dietary fructose) andthe kidney have fructokinase which converts fructose tofructose-1-P. Fructose-1-P yields glyceraldehyde andDiOHacetoneP by aldolase B enzyme action. Two steps arebypassed (hexokinase and PFK) and the rate of fructosemetabolism is greater than that of Glc.
  23. 23. Galactose metabolism: Dietary source is lactose from milk or milk products. Lactose  Glc + Galactose Dietary disaccarides are hydrolyzed to monosaccarides by enzymes lining the small intestine. – Maltose  2D-Glc – Lactose  D-Glc + D-Gal – Sucrose  > D-Glc + D-Fructose – Trehalose  2D-Glc
  24. 24. Galactose metabolismGal  Glc-6-P in four steps 1. Gal  Glc interconversion pathway 2. Gal-1-P then takes uridyl group 3. UDP-Gal’s Gal is then epimerized to Glc 4. Finally, Glc-1-P isomerized to G-6-P
  25. 25. Many adults are intolerant ofmilk due to lactase deficiency Lactose intolerance or hypolactasia – Deficiency is not quiet the appropriate term – Lactase activity declines to 5 to 10% of the level of birth – Most Africans and almost all Asians have very low levels! – Populations with a tradition of herding cattle (northern Europeans) continue to express lactase gene Problem is diarrhea. Treatment is easy now: Milk products (lactose has been hydrolyzed enzymatically) and lactase- containing pills are widely available.
  26. 26. Galactose is highly toxic Galactosemia: Gal-1-P-uridyl transferase deficiency – Fail to thrive – Vomit – Jaundice – Cirrhosis – Cataracts Blood Gal is high. The absence of the transferase in RBCs definitive diagnosis. Why cataracts?
  27. 27. BSO+NACA Grade 0
  28. 28. BSO only (grade 3)
  29. 29. Control (Grade 0)
  30. 30. NACA only (Grade 0)
  31. 31. REGULATION OF CARBOHYDRATE CATABOLISMCarbohydrate catabolism provides:  ATP  precursors, building blocks of some other biosynthetic processesATP level for a cell should be almost constant. ATP production  ATP consumption balanceWe undergo lots of changes which affect metabolismsuch as:  increased muscular activity  decreased oxygen availability  decreased carbohydrate intake
  32. 32. moreEvents alter ATP production and utilization. SinceATP levels should be kept almost constant, we needto regulate some enzymes in glycolysis pathway.There are 4 enzymes that play a role in this regulation(in liver and muscle) 1. Glycogen phosphorylase, hormonal, allosteric, Ca++ 2. Hexokinase 3. PFK-1 4. PK
  33. 33. Hexokinase Muscle hexokinase is inhibited by Glc-6-P. Whenever Glc-6-P is increased, this enzyme is inhibited. Glucokinase is an isozyme of hexokinase (also called hexokinase-D) – Isozymes are different proteins that catalyze the same reaction.
  34. 34.  PFK-1 is under complex allosteric regulation MOST IMPORTANT CONTROL POINT F-6-P + ATP  F1,6 bisP + ADP • ATP • pH • Citrate (key intermediate of TCA cycle) • Fructose 2,6 bisphosphate
  35. 35. PK Increased ATP concentrations inhibit PK allosterically by decreasing its affinity to its substrate. PEP PK is also inhibited by Acetyl-CoA. PEP  Pyruvate  Acetyl-CoA Several different forms exist (L and M) • F 1,6 bisP activates PK to keep pace with oncoming high flux of intermediates. • ATP inhibits, enough energy! • Alanine also inhibits PK • Reversible phosphorylation of the enzyme also controls this enzyme’s action.
  36. 36. Family of Glc transporters Common structure: – 12 transmembrane segments The members of this family have some distinctive roles: • glut1 and glut3 • glut2 • glut4 • glut5
  37. 37. Cancer and glycolysis Tumors have high rate of glc uptake and glycolysis Why? Hypoxic area in tumors Consequences of the adaptation