Ric 2.0   bl workshop 2010
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Ric 2.0   bl workshop 2010 Ric 2.0 bl workshop 2010 Presentation Transcript

  • RIC 2.0
    Oscar NaimAlex Wade
  • RESEARCHER PRODUCTIVITY
    Make complex tasks simple
  • Data Deposit
    Data Management
    Research Information Centre
    Data Visualization
    Authoring
    Data Analysis
    Data Sharing
  • RIC 2.0 – The New Wave!
    Based on key ideas, conceptsand lessons learnedfrom RIC 1.0.
    Brand new code base built on top of SharePoint 2010 features.
    Re-usable building blocks strategy.
    Collection of experiences based on particular areas (e.g. Biology Workflow Experience, Federated Search Experience, etc).
    Available in multiple flavors (e.g. SODA, BPOS-S, BPOS-D, On Site, Live@EDU).
    Light and composable.
    RIC 2.0 is a philosophyrather than an actual product.
  • Project Trident
    Research Information Centre
    Integrated Workflow Experience for the RIC
    Data Management
  • Project Trident – a Scientific Workflow Workbench
    Share workflows via
    Author, Execute and Monitor Workflows
    Compose and modify workflows via drag & drop canvas
    View data products, performance metrics, and provenance data
    Version 1.2 (Open Source under Apache 2.0 License):
    http://tridentworkflow.codeplex.com/
  • Biology Workflow Experience
    Trident Composer
    Trident Workflows
    SharePoint 2010
    Trident Workflow Server
  • Integrated Workflow Experiencefor the Research Information Centre
    From the RIC, researchers can…
    • View/execute/monitor scientific workflows within the context of project collaboration site
    • Receive alerts (email, SMS) when workflows complete
    • Browse workflow execution history and provenance information
    • Review/store/manage data files that are written back into SharePoint by Trident
  • Ric2.0 demo
    Biology Workflow Experience
  • Project Trident
    Research Information Centre
    Word 2010
    Authoring
    Include Data and Data artifacts in compound documents
  • Article Authoring Add-in for Word
    Read, convert, and author NLM XML documents
    Repository deposit via SWORD
    ORE Resource Map creation
    v.2 beta 3:
    http://research.microsoft.com/authoring/
  • Data Deposit
    Zentity
    Project Trident
    Research Information Centre
    Word 2010
    SWORD client for SharePoint
  • Zentity – a Research Output Repository Platform
    Native support for RSS, OAI-PMH, OAI-ORE, AtomPub and SWORD
    A semantic computing platform to store and expose relationships between digital assets
    Flexible data model enables many scenarios and can be easily extended over time
    v.1 (v.2 Tech Preview available soon!) :
    http://research.microsoft.com/zentity/
  • SWORD client for SharePoint
    send to
    object
  • Archive this file in Repository X
  • SWORD client forSharePoint
    From SharePoint (and the RIC), researchers can…
    • Select any file in SharePoint:
    Document
    Presentation
    Image
    Data files
    and publish it to any repository (via SWORD)
    • SWORD endpoints are managed as a custom list, so new locations are easily added
  • Ric 2.0 demo
    SWORD Publishing
  • Zentity
    Project Trident
    Research Information Centre
    Word 2010
    Excel 2010
    Data Analysis
    through Excel 2010
  • Metagenomics
    Using Azure cloud to host standard sequence data
    Run BLAST in parallel “map reduce” style for a large collection input
    Use Excel-based tool to search databases.
    selects DBs and
    input sequence
    • Performance: speedup
    • 45x with 50 roles; 94x with 100 roles;
    • with 300 roles computation time is reduced to 4 hours !
    Web Role
    Input Splitter
    Worker Role
    BLAST
    Execution
    Worker
    Role #n
    BLAST
    Execution
    Worker
    Role #1
    ….
    Azure Blob Storage
    BLAST DB
    Configuration
    Genome
    DB 1
    Genome
    DB K
    Combiner
    Worker Role
  • Zentity
    Project Trident
    Research Information Centre
    Word 2010
    Data Sharing
    OData Protocol
    Excel 2010
    OData
  • A RESTful Interface for Data
    http://www.odata.org
  • URL Conventions
    Addressing lists and items
    Presentation options
    http://www.odata.org
  • OData Producers
    SharePoint 2010
    IBM Websphere
    Windows Azure Table Storage & SQL Azure
    Zentity 2.0
    Services:
    Facebook Insights
    Netflix
    Open Government Data Initiative
    Open Science Data Initiative
    DBPedia
    OData Consumers
    Web Browsers
    Excel 2010
    LinQPad
    Client libraries for
    Javascript
    PHP
    Java
    Windows 7 Phone
    iPhone (Objective C)
    .NET
    http://www.odata.org
  • RIC 2.0 demo
    Excel Power Pivot
  • Zentity
    Project Trident
    Research Information Centre
    Visualizing Data
    Pivot
    Word 2010
    Excel 2010
    OData
  • http://www.getpivot.com
  • What’s next?
    Moving forward!
  • Federated Search Experience
    HTML to XML convertor
    Open Search
    OAI-PMH
    OCLC
    OData source
    Extensibility for custom adapters
  • Moving Forward
    Gallery of experiences
    Web-parts community
    Parallel development
    RIC in the cloud (BPOS)
  • Questions?
    Oscar Naim
    Senior Research Program Manager
    Microsoft External Research
    onaim@microsoft.com
    http://research.microsoft.com/people/onaim
    URL – http://www.microsoft.com/scholarlycomm/
    Facebook: Scholarly Communication at Microsoft