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Brad Chapman
 Affiliation
 Department of Molecular Biology
 Massachusetts General Hospital, Boston, US

 Projects
 Biopython...
Biology


     Many organisms (Human, Mouse,
     Arabidopsis, C elegans)
     Next generation sequencing
     Comparative...
Computation


    Open source software (Python)
    Web presentation (Galaxy)
    Visualization (R)
    Data availability ...
Hackathon

    Learn
        Existing RDF data resources
        Approaches for storing/querying data
    Implement
      ...
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BioHackathon 2010 Intro

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BioHackathon 2010 Intro
http://hackathon3.dbcls.jp/

Published in: Entertainment & Humor
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Transcript of "BioHackathon 2010 Intro"

  1. 1. Brad Chapman Affiliation Department of Molecular Biology Massachusetts General Hospital, Boston, US Projects Biopython: http://biopython.org Contacts chapmanb@50mail.com http://bcbio.wordpress.com http://friendfeed.com/chapmanb http://www.linkedin.com/pub/ brad-chapman/3/300/8ba
  2. 2. Biology Many organisms (Human, Mouse, Arabidopsis, C elegans) Next generation sequencing Comparative genomics Synthetic biology
  3. 3. Computation Open source software (Python) Web presentation (Galaxy) Visualization (R) Data availability (REST)
  4. 4. Hackathon Learn Existing RDF data resources Approaches for storing/querying data Implement Python libraries to simplify data access Tools to ease providing RDF content
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