SlideShare a Scribd company logo
1 of 22
Download to read offline
InterMine
Open source data warehouse and web interface



                                      Richard Smith
                           University of Cambridge


                    Demo: Monday 12:15 room 701B
                           Poster: E34 (Monday)

                            www.intermine.org
Overview
•   Query-optimised data warehouse system
•   Java, object-based data model
•   Flexible querying

                                     Web
                                  application

    Integrate    InterMine          Query
       data      data warehouse      API

                                     Web
                                   services
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008
Smith Inter Mine Bosc2008

More Related Content

Similar to Smith Inter Mine Bosc2008

Similar to Smith Inter Mine Bosc2008 (20)

From research to business: the Web of linked data
From research to business: the Web of linked dataFrom research to business: the Web of linked data
From research to business: the Web of linked data
 
Linked Data past, present and futures
Linked Datapast, present and futuresLinked Datapast, present and futures
Linked Data past, present and futures
 
Web Data Extraction: A Crash Course
Web Data Extraction: A Crash CourseWeb Data Extraction: A Crash Course
Web Data Extraction: A Crash Course
 
Quick Intro to InterMine within AIP and MTGD - JCVI Research Works-in-Progres...
Quick Intro to InterMine within AIP and MTGD - JCVI Research Works-in-Progres...Quick Intro to InterMine within AIP and MTGD - JCVI Research Works-in-Progres...
Quick Intro to InterMine within AIP and MTGD - JCVI Research Works-in-Progres...
 
Introduction to APIs and Linked Data
Introduction to APIs and Linked DataIntroduction to APIs and Linked Data
Introduction to APIs and Linked Data
 
Vanessa lopez linked data and search
Vanessa lopez   linked data and searchVanessa lopez   linked data and search
Vanessa lopez linked data and search
 
Hello Open World - The Web of Data for the Pragmatic Developer
Hello Open World - The Web of Data for the Pragmatic DeveloperHello Open World - The Web of Data for the Pragmatic Developer
Hello Open World - The Web of Data for the Pragmatic Developer
 
Learning Regular Expressions for the Extraction of Product Attributes from E-...
Learning Regular Expressions for the Extraction of Product Attributes from E-...Learning Regular Expressions for the Extraction of Product Attributes from E-...
Learning Regular Expressions for the Extraction of Product Attributes from E-...
 
Web mining
Web miningWeb mining
Web mining
 
From open data to API-driven business
From open data to API-driven businessFrom open data to API-driven business
From open data to API-driven business
 
Open Data at Edinburgh City Council
Open Data at Edinburgh City CouncilOpen Data at Edinburgh City Council
Open Data at Edinburgh City Council
 
iMicrobe and iVirus: Extending the iPlant cyberinfrastructure from plants to ...
iMicrobe and iVirus: Extending the iPlant cyberinfrastructure from plants to ...iMicrobe and iVirus: Extending the iPlant cyberinfrastructure from plants to ...
iMicrobe and iVirus: Extending the iPlant cyberinfrastructure from plants to ...
 
Bionimbus - Northwestern CGI Workshop 4-21-2011
Bionimbus - Northwestern CGI Workshop 4-21-2011Bionimbus - Northwestern CGI Workshop 4-21-2011
Bionimbus - Northwestern CGI Workshop 4-21-2011
 
Social web & linked data
Social web & linked dataSocial web & linked data
Social web & linked data
 
Research, the Cloud, and the IRB
Research, the Cloud, and the IRBResearch, the Cloud, and the IRB
Research, the Cloud, and the IRB
 
Xu Xing: EasyGenomics – Next Generation Bioinformatics on the Cloud
Xu Xing: EasyGenomics – Next Generation Bioinformatics on the CloudXu Xing: EasyGenomics – Next Generation Bioinformatics on the Cloud
Xu Xing: EasyGenomics – Next Generation Bioinformatics on the Cloud
 
Data wrangling week 11
Data wrangling week 11Data wrangling week 11
Data wrangling week 11
 
Hello Open World - Semtech 2009
Hello Open World - Semtech 2009Hello Open World - Semtech 2009
Hello Open World - Semtech 2009
 
Data Ingestion At Scale (CNECCS 2017)
Data Ingestion At Scale (CNECCS 2017)Data Ingestion At Scale (CNECCS 2017)
Data Ingestion At Scale (CNECCS 2017)
 
Methodological Guidelines for Publishing Linked Data
Methodological Guidelines for Publishing Linked DataMethodological Guidelines for Publishing Linked Data
Methodological Guidelines for Publishing Linked Data
 

More from bosc_2008

Lee Apollo Bosc2008
Lee Apollo Bosc2008Lee Apollo Bosc2008
Lee Apollo Bosc2008
bosc_2008
 
Kallio Chipster Bosc2008
Kallio Chipster Bosc2008Kallio Chipster Bosc2008
Kallio Chipster Bosc2008
bosc_2008
 
Bhagat Myexperiment Bosc2008
Bhagat Myexperiment Bosc2008Bhagat Myexperiment Bosc2008
Bhagat Myexperiment Bosc2008
bosc_2008
 
Introduction Bosc2008
Introduction Bosc2008Introduction Bosc2008
Introduction Bosc2008
bosc_2008
 
Smith T Bio Hdf Bosc2008
Smith T Bio Hdf Bosc2008Smith T Bio Hdf Bosc2008
Smith T Bio Hdf Bosc2008
bosc_2008
 
Kitzmiller Openhelisphereproject Bosc2008
Kitzmiller Openhelisphereproject Bosc2008Kitzmiller Openhelisphereproject Bosc2008
Kitzmiller Openhelisphereproject Bosc2008
bosc_2008
 
Heuer Bio Java Bosc2008
Heuer Bio Java Bosc2008Heuer Bio Java Bosc2008
Heuer Bio Java Bosc2008
bosc_2008
 
Andy Jenkinson Bosc Das 2008
Andy Jenkinson Bosc Das 2008Andy Jenkinson Bosc Das 2008
Andy Jenkinson Bosc Das 2008
bosc_2008
 
Mackey Bio Perl Bosc2008
Mackey Bio Perl Bosc2008Mackey Bio Perl Bosc2008
Mackey Bio Perl Bosc2008
bosc_2008
 
Faga C Map Bosc2008
Faga C Map Bosc2008Faga C Map Bosc2008
Faga C Map Bosc2008
bosc_2008
 
Prins Bio Lib Bosc2008
Prins Bio Lib Bosc2008Prins Bio Lib Bosc2008
Prins Bio Lib Bosc2008
bosc_2008
 
Greene Bosc2008
Greene Bosc2008Greene Bosc2008
Greene Bosc2008
bosc_2008
 
Gnaneshan Public Health Bosc2008
Gnaneshan Public Health Bosc2008Gnaneshan Public Health Bosc2008
Gnaneshan Public Health Bosc2008
bosc_2008
 
Gordon Semantic Web 2008
Gordon Semantic Web 2008Gordon Semantic Web 2008
Gordon Semantic Web 2008
bosc_2008
 
Menager Mobyle Bosc2008
Menager Mobyle Bosc2008Menager Mobyle Bosc2008
Menager Mobyle Bosc2008
bosc_2008
 
Haider Embrace Bosc2008
Haider Embrace Bosc2008Haider Embrace Bosc2008
Haider Embrace Bosc2008
bosc_2008
 
Antao Biopython Bosc2008
Antao Biopython Bosc2008Antao Biopython Bosc2008
Antao Biopython Bosc2008
bosc_2008
 
Banks Genographer Bosc2008
Banks Genographer Bosc2008Banks Genographer Bosc2008
Banks Genographer Bosc2008
bosc_2008
 
Wilson Make Bosc2008
Wilson Make Bosc2008Wilson Make Bosc2008
Wilson Make Bosc2008
bosc_2008
 
O Connor Solexa Tools Bosc2008
O Connor Solexa Tools Bosc2008O Connor Solexa Tools Bosc2008
O Connor Solexa Tools Bosc2008
bosc_2008
 

More from bosc_2008 (20)

Lee Apollo Bosc2008
Lee Apollo Bosc2008Lee Apollo Bosc2008
Lee Apollo Bosc2008
 
Kallio Chipster Bosc2008
Kallio Chipster Bosc2008Kallio Chipster Bosc2008
Kallio Chipster Bosc2008
 
Bhagat Myexperiment Bosc2008
Bhagat Myexperiment Bosc2008Bhagat Myexperiment Bosc2008
Bhagat Myexperiment Bosc2008
 
Introduction Bosc2008
Introduction Bosc2008Introduction Bosc2008
Introduction Bosc2008
 
Smith T Bio Hdf Bosc2008
Smith T Bio Hdf Bosc2008Smith T Bio Hdf Bosc2008
Smith T Bio Hdf Bosc2008
 
Kitzmiller Openhelisphereproject Bosc2008
Kitzmiller Openhelisphereproject Bosc2008Kitzmiller Openhelisphereproject Bosc2008
Kitzmiller Openhelisphereproject Bosc2008
 
Heuer Bio Java Bosc2008
Heuer Bio Java Bosc2008Heuer Bio Java Bosc2008
Heuer Bio Java Bosc2008
 
Andy Jenkinson Bosc Das 2008
Andy Jenkinson Bosc Das 2008Andy Jenkinson Bosc Das 2008
Andy Jenkinson Bosc Das 2008
 
Mackey Bio Perl Bosc2008
Mackey Bio Perl Bosc2008Mackey Bio Perl Bosc2008
Mackey Bio Perl Bosc2008
 
Faga C Map Bosc2008
Faga C Map Bosc2008Faga C Map Bosc2008
Faga C Map Bosc2008
 
Prins Bio Lib Bosc2008
Prins Bio Lib Bosc2008Prins Bio Lib Bosc2008
Prins Bio Lib Bosc2008
 
Greene Bosc2008
Greene Bosc2008Greene Bosc2008
Greene Bosc2008
 
Gnaneshan Public Health Bosc2008
Gnaneshan Public Health Bosc2008Gnaneshan Public Health Bosc2008
Gnaneshan Public Health Bosc2008
 
Gordon Semantic Web 2008
Gordon Semantic Web 2008Gordon Semantic Web 2008
Gordon Semantic Web 2008
 
Menager Mobyle Bosc2008
Menager Mobyle Bosc2008Menager Mobyle Bosc2008
Menager Mobyle Bosc2008
 
Haider Embrace Bosc2008
Haider Embrace Bosc2008Haider Embrace Bosc2008
Haider Embrace Bosc2008
 
Antao Biopython Bosc2008
Antao Biopython Bosc2008Antao Biopython Bosc2008
Antao Biopython Bosc2008
 
Banks Genographer Bosc2008
Banks Genographer Bosc2008Banks Genographer Bosc2008
Banks Genographer Bosc2008
 
Wilson Make Bosc2008
Wilson Make Bosc2008Wilson Make Bosc2008
Wilson Make Bosc2008
 
O Connor Solexa Tools Bosc2008
O Connor Solexa Tools Bosc2008O Connor Solexa Tools Bosc2008
O Connor Solexa Tools Bosc2008
 

Recently uploaded

Why Teams call analytics are critical to your entire business
Why Teams call analytics are critical to your entire businessWhy Teams call analytics are critical to your entire business
Why Teams call analytics are critical to your entire business
panagenda
 
Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers:  A Deep Dive into Serverless Spatial Data and FMECloud Frontiers:  A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
Safe Software
 

Recently uploaded (20)

Why Teams call analytics are critical to your entire business
Why Teams call analytics are critical to your entire businessWhy Teams call analytics are critical to your entire business
Why Teams call analytics are critical to your entire business
 
DEV meet-up UiPath Document Understanding May 7 2024 Amsterdam
DEV meet-up UiPath Document Understanding May 7 2024 AmsterdamDEV meet-up UiPath Document Understanding May 7 2024 Amsterdam
DEV meet-up UiPath Document Understanding May 7 2024 Amsterdam
 
Rising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdf
Rising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdfRising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdf
Rising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdf
 
ICT role in 21st century education and its challenges
ICT role in 21st century education and its challengesICT role in 21st century education and its challenges
ICT role in 21st century education and its challenges
 
AWS Community Day CPH - Three problems of Terraform
AWS Community Day CPH - Three problems of TerraformAWS Community Day CPH - Three problems of Terraform
AWS Community Day CPH - Three problems of Terraform
 
Navigating the Deluge_ Dubai Floods and the Resilience of Dubai International...
Navigating the Deluge_ Dubai Floods and the Resilience of Dubai International...Navigating the Deluge_ Dubai Floods and the Resilience of Dubai International...
Navigating the Deluge_ Dubai Floods and the Resilience of Dubai International...
 
presentation ICT roal in 21st century education
presentation ICT roal in 21st century educationpresentation ICT roal in 21st century education
presentation ICT roal in 21st century education
 
Cyberprint. Dark Pink Apt Group [EN].pdf
Cyberprint. Dark Pink Apt Group [EN].pdfCyberprint. Dark Pink Apt Group [EN].pdf
Cyberprint. Dark Pink Apt Group [EN].pdf
 
MINDCTI Revenue Release Quarter One 2024
MINDCTI Revenue Release Quarter One 2024MINDCTI Revenue Release Quarter One 2024
MINDCTI Revenue Release Quarter One 2024
 
Exploring the Future Potential of AI-Enabled Smartphone Processors
Exploring the Future Potential of AI-Enabled Smartphone ProcessorsExploring the Future Potential of AI-Enabled Smartphone Processors
Exploring the Future Potential of AI-Enabled Smartphone Processors
 
2024: Domino Containers - The Next Step. News from the Domino Container commu...
2024: Domino Containers - The Next Step. News from the Domino Container commu...2024: Domino Containers - The Next Step. News from the Domino Container commu...
2024: Domino Containers - The Next Step. News from the Domino Container commu...
 
Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers:  A Deep Dive into Serverless Spatial Data and FMECloud Frontiers:  A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
 
Apidays New York 2024 - Scaling API-first by Ian Reasor and Radu Cotescu, Adobe
Apidays New York 2024 - Scaling API-first by Ian Reasor and Radu Cotescu, AdobeApidays New York 2024 - Scaling API-first by Ian Reasor and Radu Cotescu, Adobe
Apidays New York 2024 - Scaling API-first by Ian Reasor and Radu Cotescu, Adobe
 
Axa Assurance Maroc - Insurer Innovation Award 2024
Axa Assurance Maroc - Insurer Innovation Award 2024Axa Assurance Maroc - Insurer Innovation Award 2024
Axa Assurance Maroc - Insurer Innovation Award 2024
 
Spring Boot vs Quarkus the ultimate battle - DevoxxUK
Spring Boot vs Quarkus the ultimate battle - DevoxxUKSpring Boot vs Quarkus the ultimate battle - DevoxxUK
Spring Boot vs Quarkus the ultimate battle - DevoxxUK
 
Web Form Automation for Bonterra Impact Management (fka Social Solutions Apri...
Web Form Automation for Bonterra Impact Management (fka Social Solutions Apri...Web Form Automation for Bonterra Impact Management (fka Social Solutions Apri...
Web Form Automation for Bonterra Impact Management (fka Social Solutions Apri...
 
Ransomware_Q4_2023. The report. [EN].pdf
Ransomware_Q4_2023. The report. [EN].pdfRansomware_Q4_2023. The report. [EN].pdf
Ransomware_Q4_2023. The report. [EN].pdf
 
Strategies for Landing an Oracle DBA Job as a Fresher
Strategies for Landing an Oracle DBA Job as a FresherStrategies for Landing an Oracle DBA Job as a Fresher
Strategies for Landing an Oracle DBA Job as a Fresher
 
Strategize a Smooth Tenant-to-tenant Migration and Copilot Takeoff
Strategize a Smooth Tenant-to-tenant Migration and Copilot TakeoffStrategize a Smooth Tenant-to-tenant Migration and Copilot Takeoff
Strategize a Smooth Tenant-to-tenant Migration and Copilot Takeoff
 
CNIC Information System with Pakdata Cf In Pakistan
CNIC Information System with Pakdata Cf In PakistanCNIC Information System with Pakdata Cf In Pakistan
CNIC Information System with Pakdata Cf In Pakistan
 

Smith Inter Mine Bosc2008

  • 1. InterMine Open source data warehouse and web interface Richard Smith University of Cambridge Demo: Monday 12:15 room 701B Poster: E34 (Monday) www.intermine.org
  • 2. Overview • Query-optimised data warehouse system • Java, object-based data model • Flexible querying Web application Integrate InterMine Query data data warehouse API Web services