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Banks Genographer Bosc2008
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Banks Genographer Bosc2008

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Transcript

  • 1. Genographer – A program for AFLP visualization BOSC 2008
  • 2.
    • Amplified Fragment Length Polymorphism
    • Difference in fragment size between individuals in a population is a genetic marker
    • Traditionally viewed on acrylamide or agarose gels
  • 3. Then
  • 4. Genographer
    • Started by James Benham in 1998
    • Development stop 2001
    • ABI evolved their technology and broke Genographer
    • GPLv2
  • 5. Now
  • 6.  
  • 7.  
  • 8.  
  • 9.
    • Many different file types supported (including raw fsa from ABI)
    • GPLv2
    • Lots still to be done!
    • http://sourceforge.net/projects/genographer