Bioinformatics Projects and Applications Paulsharma Chakravarthy [email_address]

Approaches Design and implementation of new algorithms and statistics which assess relationship among members of large data sets. Analysis and interpretation of various data types, which includes nucleotide and amino acid sequences and structure of protein. To develop computational tools and databases that enables efficient analysis, access and management of biologically significant information.

Design and implementation of new algorithms and statistics which assess relationship among members of large data sets.

Analysis and interpretation of various data types, which includes nucleotide and amino acid sequences and structure of protein.

To develop computational tools and databases that enables efficient analysis, access and management of biologically significant information.

Bioinformatics Tools Sequence Analysis Structure Visualization Structural Analysis Molecular Simulation and Dynamics Molecular Docking Cheminformatics Tools Data Mining Tools

Sequence Analysis

Structure Visualization

Structural Analysis

Molecular Simulation and Dynamics

Molecular Docking

Cheminformatics Tools

Data Mining Tools

Various Specialized Application Gene Prediction Genome Annotation Structure Prediction Expression Analysis Drug Discovery Compound Screening

Gene Prediction

Genome Annotation

Structure Prediction

Expression Analysis

Drug Discovery

Compound Screening

Research Projects Analyzing raw experiment data Gene Prediction and Genome Annotation Sequence Analysis of unique genes Codon Usage Analysis Analyzing Microarray expression data

Analyzing raw experiment data

Gene Prediction and Genome Annotation

Sequence Analysis of unique genes

Codon Usage Analysis

Analyzing Microarray expression data

Phylogenetics Protein Folding and Structural Analysis Structure prediction and Molecular Modeling Molecular Docking Development of Secondary structure Algorithm

Phylogenetics

Protein Folding and Structural Analysis

Structure prediction and Molecular Modeling

Molecular Docking

Development of Secondary structure Algorithm

Drug discovery Identification of Drug Targets Designing a Bioinformatics Software Designing a Bioinformatics database Comparative Genomics Cancer Genomics Metabolic pathway analysis Metabolic pathway mapping

Drug discovery

Identification of Drug Targets

Designing a Bioinformatics Software

Designing a Bioinformatics database

Comparative Genomics

Cancer Genomics

Metabolic pathway analysis

Metabolic pathway mapping

Cheminformatics Molecule screening for drug discovery In silico Drug Likeness In silico ADMET Molecular simulation Web based Applications / web datasets

Cheminformatics

Molecule screening for drug discovery

In silico Drug Likeness

In silico ADMET

Molecular simulation

Web based Applications / web datasets

Project Steps Identify a relevant problem Define the problem Literature Review Objective to find solution for the chosen problem Methods Results expected Analysis Interpretation Documentation

Identify a relevant problem

Define the problem

Literature Review

Objective to find solution for the chosen problem

Methods

Results expected

Analysis

Interpretation

Documentation